Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15300 and ABID97_RS15305 are separated by 90 nucleotidesABID97_RS15305 and ABID97_RS15310 are separated by 10 nucleotidesABID97_RS15310 and ABID97_RS15315 overlap by 4 nucleotidesABID97_RS15315 and ABID97_RS15320 are separated by 54 nucleotides ABID97_RS15300: ABID97_RS15300 - tRNA-Asn, at 3,165,828 to 3,165,903 _RS15300 ABID97_RS15305: ABID97_RS15305 - TonB-dependent siderophore receptor, at 3,165,994 to 3,168,150 _RS15305 ABID97_RS15310: ABID97_RS15310 - thiamine phosphate synthase, at 3,168,161 to 3,169,093 _RS15310 ABID97_RS15315: ABID97_RS15315 - thiazole synthase, at 3,169,090 to 3,169,893 _RS15315 ABID97_RS15320: ABID97_RS15320 - sulfur carrier protein ThiS, at 3,169,948 to 3,170,151 _RS15320
Group Condition ABID97_RS15300 ABID97_RS15305 ABID97_RS15310 ABID97_RS15315 ABID97_RS15320
carbon source L-tyrosine (C) N.D. -0.1 -0.9 -0.2 N.D.
carbon source L-Asparagine (C) N.D. -0.1 -0.6 -0.4 N.D.
carbon source Glycerol (C) N.D. -0.1 -0.5 -0.6 N.D.
carbon source L-tyrosine (C) N.D. -0.2 -0.6 -0.3 N.D.
carbon source D,L-Malic Acid (C) N.D. -0.2 -0.4 -0.5 N.D.
carbon source L-Malic (C) N.D. -0.1 -0.5 -0.5 N.D.
carbon source Glucuronamide (C) N.D. -0.1 -0.4 -0.5 N.D.
carbon source D-Arabinose (C) N.D. -0.2 -0.8 +0.0 N.D.
carbon source succinate (C) N.D. -0.1 -0.3 -0.6 N.D.
carbon source D-Arabinose (C) N.D. -0.2 -0.4 -0.3 N.D.
carbon source D,L-Malic Acid (C) N.D. -0.1 -0.5 -0.3 N.D.
carbon source Glycolic Acid (C) N.D. -0.1 -0.7 -0.1 N.D.
carbon source L-Fucose (C) N.D. -0.1 -0.4 -0.4 N.D.
carbon source propionate (C) N.D. +0.2 -0.3 -0.7 N.D.
carbon source Formate (C) N.D. -0.2 +0.1 -0.6 N.D.
r2a outgrowth control R2A outgrowth control N.D. -0.1 -0.6 +0.1 N.D.
control NP N.D. -0.1 -0.8 +0.4 N.D.
carbon source D,L-Lactate (C) N.D. -0.2 +0.2 -0.5 N.D.
carbon source a-Ketoglutaric (C) N.D. -0.0 +0.4 -0.6 N.D.
carbon source L-Phenylalanine (C) N.D. -0.1 +0.4 -0.4 N.D.
phage V2_1 N.D. -0.0 -0.5 +0.4 N.D.
carbon source propionate (C) N.D. +0.1 +0.3 -0.5 N.D.
phage V2_100 N.D. -0.1 +0.4 -0.3 N.D.
carbon source L-Fucose (C) N.D. -0.1 +0.5 -0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.1 +0.7 -0.4 N.D.
r2a outgrowth control R2A outgrowth control N.D. -0.3 -0.4 +0.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 -0.1 +0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 +0.1 +0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.1 +0.3 +0.6 N.D.
carbon source butyrate (C) N.D. -0.0 +1.1 +0.1 N.D.
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