Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS15210 and ABID97_RS15215 overlap by 4 nucleotidesABID97_RS15215 and ABID97_RS15220 overlap by 8 nucleotidesABID97_RS15220 and ABID97_RS15225 overlap by 4 nucleotidesABID97_RS15225 and ABID97_RS15230 are separated by 4 nucleotides ABID97_RS15210: ABID97_RS15210 - lysis system i-spanin subunit Rz, at 3,150,214 to 3,150,744 _RS15210 ABID97_RS15215: ABID97_RS15215 - lysozyme, at 3,150,741 to 3,151,316 _RS15215 ABID97_RS15220: ABID97_RS15220 - hypothetical protein, at 3,151,309 to 3,151,608 _RS15220 ABID97_RS15225: ABID97_RS15225 - hypothetical protein, at 3,151,605 to 3,152,018 _RS15225 ABID97_RS15230: ABID97_RS15230 - tail protein X, at 3,152,023 to 3,152,226 _RS15230
Group Condition ABID97_RS15210 ABID97_RS15215 ABID97_RS15220 ABID97_RS15225 ABID97_RS15230
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.5 N.D. N.D. -1.2
carbon source Adenine (C) N.D. -2.5 N.D. N.D. -0.2
carbon source propionate (C) N.D. -1.3 N.D. N.D. -0.3
r2a outgrowth control R2A outgrowth control N.D. -1.2 N.D. N.D. -0.4
carbon source L-tyrosine (C) N.D. +1.0 N.D. N.D. -2.3
carbon source Gly-Glu (C) N.D. -1.2 N.D. N.D. -0.0
phage V1_10 N.D. -1.0 N.D. N.D. -0.1
carbon source D-Mannose (C) N.D. -0.9 N.D. N.D. -0.1
phage V2_10 N.D. -0.8 N.D. N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.5 N.D. N.D. -1.5
carbon source L-Glutamine (C) N.D. -1.1 N.D. N.D. +0.3
carbon source D-Mannose (C) N.D. -1.1 N.D. N.D. +0.2
carbon source L-Fucose (C) N.D. -0.9 N.D. N.D. +0.1
carbon source Fumarate (C) N.D. -1.0 N.D. N.D. +0.2
carbon source Tween 20 (C) N.D. -1.0 N.D. N.D. +0.5
carbon source D-Arabinose (C) N.D. +0.8 N.D. N.D. -0.6
carbon source D-Ribose (C) N.D. +0.7 N.D. N.D. -0.4
carbon source casaminos (C) N.D. +1.0 N.D. N.D. -0.6
r2a outgrowth control R2A outgrowth control N.D. +0.9 N.D. N.D. -0.1
carbon source D-Serine (C) N.D. +0.8 N.D. N.D. -0.1
carbon source Glucuronamide (C) N.D. +1.3 N.D. N.D. -0.5
control NP N.D. +0.7 N.D. N.D. +0.2
carbon source pyruvate (C) N.D. +0.7 N.D. N.D. +0.2
carbon source L-Proline (C) N.D. +0.7 N.D. N.D. +0.2
carbon source pyruvate (C) N.D. +0.9 N.D. N.D. +0.1
carbon source L-Lactate (C) N.D. +0.9 N.D. N.D. +0.2
carbon source L-Phenylalanine (C) N.D. +0.8 N.D. N.D. +0.3
carbon source D,L-Malic Acid (C) N.D. +1.2 N.D. N.D. -0.1
phage V2_100 N.D. +1.2 N.D. N.D. +0.0
carbon source D-Ribose (C) N.D. +1.0 N.D. N.D. +0.4
remove
ABID97_RS15210
plot		 remove
ABID97_RS15215
plot		 remove
ABID97_RS15220		 remove
ABID97_RS15225
plot		 remove
ABID97_RS15230
plot