Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15135 and ABID97_RS15140 are separated by 13 nucleotidesABID97_RS15140 and ABID97_RS15145 are separated by 78 nucleotidesABID97_RS15145 and ABID97_RS15150 are separated by 8 nucleotidesABID97_RS15150 and ABID97_RS15155 are separated by 52 nucleotides ABID97_RS15135: ABID97_RS15135 - phage tail protein, at 3,137,928 to 3,138,353 _RS15135 ABID97_RS15140: ABID97_RS15140 - phage tail tape measure protein, at 3,138,367 to 3,141,051 _RS15140 ABID97_RS15145: ABID97_RS15145 - GpE family phage tail protein, at 3,141,130 to 3,141,246 _RS15145 ABID97_RS15150: ABID97_RS15150 - phage tail assembly protein, at 3,141,255 to 3,141,566 _RS15150 ABID97_RS15155: ABID97_RS15155 - phage major tail tube protein, at 3,141,619 to 3,142,128 _RS15155
Group Condition ABID97_RS15135 ABID97_RS15140 ABID97_RS15145 ABID97_RS15150 ABID97_RS15155
carbon source L-tyrosine (C) N.D. +0.5 N.D. -4.1 -0.5
carbon source propionate (C) N.D. +0.0 N.D. -3.0 -0.4
carbon source L-Alanine (C) N.D. +0.0 N.D. -1.5 -0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.3 N.D. -1.1 -0.3
carbon source L-Asparagine (C) N.D. -0.0 N.D. -1.0 -0.6
phage V2_10 N.D. -0.2 N.D. -0.3 -0.6
carbon source Formate (C) N.D. +0.2 N.D. +0.0 -1.0
carbon source propionate (C) N.D. -0.3 N.D. -0.7 +0.2
carbon source L-Arabinose (C) N.D. +0.2 N.D. -1.0 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 N.D. +0.6 -0.8
carbon source D-Sorbitol (C) N.D. +0.1 N.D. +0.4 -0.9
carbon source Gly-Glu (C) N.D. -0.1 N.D. +0.5 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.4 N.D. +0.5 -0.3
carbon source D-Mannose (C) N.D. +0.4 N.D. -0.7 +0.2
carbon source pyruvate (C) N.D. +0.0 N.D. +0.6 -0.6
carbon source L-Alanine (C) N.D. -0.2 N.D. +0.6 -0.4
carbon source D,L-Malic Acid (C) N.D. +0.3 N.D. +0.8 -1.1
carbon source L-Histidine (C) N.D. +0.2 N.D. +0.5 -0.6
carbon source L-Proline (C) N.D. +0.0 N.D. +0.8 -0.4
carbon source D-Mannose (C) N.D. +0.1 N.D. +0.7 -0.4
carbon source Fumarate (C) N.D. +0.2 N.D. +0.7 -0.3
carbon source butyrate (C) N.D. -0.0 N.D. +1.1 -0.4
carbon source D-Arabinose (C) N.D. +0.0 N.D. +1.0 -0.3
carbon source L-Lactate (C) N.D. +0.1 N.D. +0.9 -0.2
carbon source L-Phenylalanine (C) N.D. +0.3 N.D. +0.8 -0.2
carbon source D-Serine (C) N.D. +0.1 N.D. +0.9 +0.2
carbon source Ethanol (C) N.D. +0.2 N.D. +0.9 +0.3
r2a outgrowth control R2A outgrowth control N.D. +0.1 N.D. +1.3 +0.1
carbon source D-Glucuronic Acid (C) N.D. +0.3 N.D. -0.3 +1.6
phage V2_10 N.D. +0.0 N.D. +1.8 +0.5
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