Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS15010 and ABID97_RS15015 are separated by 10 nucleotidesABID97_RS15015 and ABID97_RS15020 are separated by 102 nucleotidesABID97_RS15020 and ABID97_RS15025 are separated by 521 nucleotidesABID97_RS15025 and ABID97_RS15030 are separated by 613 nucleotides ABID97_RS15010: ABID97_RS15010 - cytochrome c-550 PedF, at 3,118,372 to 3,118,890 _RS15010 ABID97_RS15015: ABID97_RS15015 - ABC transporter substrate-binding protein, at 3,118,901 to 3,119,755 _RS15015 ABID97_RS15020: ABID97_RS15020 - aldehyde dehydrogenase, at 3,119,858 to 3,121,378 _RS15020 ABID97_RS15025: ABID97_RS15025 - hypothetical protein, at 3,121,900 to 3,122,193 _RS15025 ABID97_RS15030: ABID97_RS15030 - hypothetical protein, at 3,122,807 to 3,123,352 _RS15030
Group Condition ABID97_RS15010 ABID97_RS15015 ABID97_RS15020 ABID97_RS15025 ABID97_RS15030
carbon source Ethanol (C) -0.7 -0.3 -1.1 -0.0 -0.0
phage V1_10 -0.4 -0.1 -0.2 -1.1 +0.1
carbon source D-Fructose (C) -0.9 -0.3 +0.2 -0.6 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -0.1 +0.3 -0.7 +0.2
carbon source Ethanol (C) -0.1 -0.3 -1.0 +0.7 -0.0
carbon source L-Fucose (C) -1.1 +0.1 +0.1 +0.0 +0.2
carbon source D,L-Malic Acid (C) -0.6 -0.5 +0.2 +0.1 -0.0
carbon source L-Phenylalanine (C) +0.1 -0.6 -0.3 +0.3 -0.1
carbon source Fumarate (C) -0.3 +0.0 -0.1 +0.5 -0.3
carbon source Formate (C) +0.9 +0.1 -0.5 -0.1 -0.4
carbon source L-Phenylalanine (C) +0.1 +0.2 -0.3 +0.6 -0.2
carbon source L-Glutamine (C) +0.4 +0.2 +0.2 -0.6 +0.3
carbon source D-Gluconic Acid (C) +0.7 +0.2 +0.0 -0.3 -0.2
carbon source L-Lactate (C) +0.4 +0.3 +0.3 -0.2 -0.1
carbon source a-Ketoglutaric (C) +0.6 +0.3 -0.2 -0.1 +0.1
carbon source L-Histidine (C) +0.1 +0.7 +0.2 -0.4 +0.0
carbon source D-Galactose (C) +0.3 +0.6 +0.2 -0.3 -0.1
carbon source Adenine (C) +0.4 +0.1 -0.3 +0.6 -0.0
carbon source D-Glucuronic Acid (C) +0.5 -0.5 +0.1 +0.5 +0.3
carbon source L-tyrosine (C) +1.3 +0.5 +0.1 -1.2 +0.2
carbon source Glycerol (C) +0.6 +0.4 +0.2 -0.2 +0.1
carbon source L-Threonine (C) +0.6 +0.4 -0.1 +0.3 -0.0
carbon source L-Malic (C) +0.6 +0.0 +0.1 +0.4 +0.2
carbon source acetate (C) +0.6 +0.4 +0.2 -0.0 +0.2
carbon source L-Alanine (C) +0.6 +0.4 -0.0 +0.3 +0.1
carbon source L-Leucine (C) +0.5 +0.3 -0.0 +0.4 +0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.4 +0.7 +0.3 +0.1 +0.0
carbon source Formate (C) +1.2 +0.3 -0.4 +0.3 +0.1
carbon source L-Arabinose (C) +1.0 +0.9 -0.3 +0.2 +0.2
carbon source L-Arabinose (C) +1.3 +0.7 -0.2 +0.2 +0.3
remove
ABID97_RS15010
plot		 remove
ABID97_RS15015
plot		 remove
ABID97_RS15020		 remove
ABID97_RS15025
plot		 remove
ABID97_RS15030
plot