Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS14950 and ABID97_RS14955 are separated by 54 nucleotidesABID97_RS14955 and ABID97_RS14960 overlap by 4 nucleotidesABID97_RS14960 and ABID97_RS14965 are separated by 100 nucleotidesABID97_RS14965 and ABID97_RS14970 are separated by 28 nucleotides ABID97_RS14950: ABID97_RS14950 - IclR family transcriptional regulator C-terminal domain-containing protein, at 3,107,120 to 3,107,890 _RS14950 ABID97_RS14955: ABID97_RS14955 - response regulator, at 3,107,945 to 3,108,604 _RS14955 ABID97_RS14960: ABID97_RS14960 - ATP-binding protein, at 3,108,601 to 3,109,932 _RS14960 ABID97_RS14965: ABID97_RS14965 - DegQ family serine endoprotease, at 3,110,033 to 3,111,502 _RS14965 ABID97_RS14970: ABID97_RS14970 - hypothetical protein, at 3,111,531 to 3,111,833 _RS14970
Group Condition ABID97_RS14950 ABID97_RS14955 ABID97_RS14960 ABID97_RS14965 ABID97_RS14970
carbon source D,L-Malic Acid (C) -0.9 -7.1 +0.3 -4.5 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -6.1 -0.2 +0.2 -0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -3.5 -0.1 +0.3 +0.1 N.D.
carbon source D-Glucuronic Acid (C) -1.3 -0.8 +0.1 -0.3 N.D.
carbon source Gly-Glu (C) -1.5 -0.7 -0.1 -0.0 N.D.
carbon source Gly-Glu (C) -1.3 -0.4 +0.1 -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.4 +0.2 -1.3 N.D.
carbon source L-Lactate (C) -1.1 -0.2 +0.0 -0.1 N.D.
carbon source D-Gluconic Acid (C) -0.8 -0.3 +0.1 -0.2 N.D.
carbon source Tween 20 (C) -1.2 -0.2 +0.3 -0.1 N.D.
carbon source D-Glucose (C) -0.4 -0.1 -0.2 -0.4 N.D.
carbon source D-Gluconic Acid (C) -0.7 -0.6 +0.3 +0.1 N.D.
carbon source D-Lactate (C) -0.8 +0.0 +0.3 -0.2 N.D.
carbon source D,L-Malic Acid (C) -0.2 -0.5 +0.6 -0.4 N.D.
carbon source L-Lactate (C) -0.6 -0.1 +0.3 -0.0 N.D.
carbon source D,L-Lactate (C) -0.6 -0.2 +0.5 -0.1 N.D.
carbon source acetate (C) -0.4 +0.1 +0.5 -0.3 N.D.
carbon source L-Alanine (C) -0.3 -0.3 +0.2 +0.3 N.D.
carbon source Glycolic Acid (C) -0.6 -0.1 +0.7 -0.1 N.D.
carbon source L-Malic (C) -0.7 -0.0 +0.5 +0.2 N.D.
carbon source Tween 20 (C) -0.8 +0.2 +0.6 +0.1 N.D.
carbon source D-Arabinose (C) -0.1 -0.3 +0.6 -0.1 N.D.
carbon source Formate (C) +0.1 -0.3 +0.3 +0.3 N.D.
carbon source D-Galactose (C) -0.2 +0.2 +0.4 +0.2 N.D.
carbon source L-Fucose (C) -0.3 +0.3 +0.4 +0.1 N.D.
phage V2_100 +0.2 +0.3 +0.4 -0.2 N.D.
carbon source Ethanol (C) +0.4 -0.0 +0.5 -0.1 N.D.
carbon source L-Histidine (C) +0.1 +0.3 +0.3 +0.2 N.D.
carbon source L-Arabinose (C) +0.7 -0.0 +0.5 -0.1 N.D.
carbon source Glucuronamide (C) +0.2 +0.5 +0.4 +0.2 N.D.
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ABID97_RS14950
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ABID97_RS14955
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