Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS14535 and ABID97_RS14540 are separated by 8 nucleotidesABID97_RS14540 and ABID97_RS14545 are separated by 99 nucleotidesABID97_RS14545 and ABID97_RS14550 are separated by 188 nucleotidesABID97_RS14550 and ABID97_RS14555 are separated by 235 nucleotides ABID97_RS14535: ABID97_RS14535 - hypothetical protein, at 3,021,920 to 3,022,282 _RS14535 ABID97_RS14540: ABID97_RS14540 - transcriptional regulator, at 3,022,291 to 3,022,536 _RS14540 ABID97_RS14545: ABID97_RS14545 - hypothetical protein, at 3,022,636 to 3,023,175 _RS14545 ABID97_RS14550: ABID97_RS14550 - integrase arm-type DNA-binding domain-containing protein, at 3,023,364 to 3,024,605 _RS14550 ABID97_RS14555: ABID97_RS14555 - tRNA-Pro, at 3,024,841 to 3,024,917 _RS14555
Group Condition ABID97_RS14535 ABID97_RS14540 ABID97_RS14545 ABID97_RS14550 ABID97_RS14555
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -1.8 -0.0 -0.0 N.D.
carbon source L-Arabinose (C) +0.0 -1.2 -0.1 -0.3 N.D.
carbon source L-Leucine (C) -0.2 -1.1 -0.1 -0.0 N.D.
carbon source Gly-Glu (C) -0.2 -1.0 -0.1 -0.1 N.D.
carbon source Tween 20 (C) -0.4 -0.6 -0.1 +0.1 N.D.
carbon source Glycolic Acid (C) -0.1 -0.9 -0.0 -0.1 N.D.
carbon source Glucuronamide (C) -0.3 -0.7 +0.1 -0.2 N.D.
carbon source D-Glucuronic Acid (C) -0.1 -0.5 -0.2 -0.3 N.D.
carbon source propionate (C) +0.0 -1.0 +0.2 -0.3 N.D.
carbon source Formate (C) -0.2 -0.7 +0.0 -0.2 N.D.
carbon source D-Lactate (C) -0.1 -0.6 -0.0 -0.2 N.D.
carbon source L-Histidine (C) -0.3 -0.5 +0.0 -0.1 N.D.
carbon source Fumarate (C) +0.0 -0.9 +0.1 +0.0 N.D.
carbon source D-Galactose (C) -0.2 -0.5 +0.3 -0.3 N.D.
carbon source L-Alanine (C) -0.0 -0.4 +0.1 -0.4 N.D.
r2a outgrowth control R2A outgrowth control +0.1 -0.8 -0.1 +0.1 N.D.
carbon source D-Arabinose (C) -0.4 -0.0 +0.1 -0.4 N.D.
carbon source D-Xylose (C) +0.1 -0.6 -0.1 -0.0 N.D.
carbon source Adenine (C) +0.3 -0.5 -0.0 -0.3 N.D.
carbon source L-Alanine (C) -0.3 -0.6 +0.2 +0.2 N.D.
carbon source butyrate (C) -0.4 +0.3 -0.4 +0.0 N.D.
carbon source L-Arabinose (C) -0.2 +0.2 +0.2 -0.5 N.D.
carbon source L-Histidine (C) +0.3 -0.7 -0.0 +0.2 N.D.
carbon source L-tyrosine (C) +0.0 +0.2 +0.3 -0.5 N.D.
carbon source D-Serine (C) +0.0 +0.4 -0.2 -0.3 N.D.
carbon source D-Ribose (C) -0.1 +0.5 -0.2 -0.2 N.D.
carbon source propionate (C) +0.0 +0.7 +0.2 -0.2 N.D.
carbon source L-tyrosine (C) +0.1 +0.5 -0.1 +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 +0.1 +0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.7 -0.2 +0.5 N.D.
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