Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS14440 and ABID97_RS14445 are separated by 99 nucleotidesABID97_RS14445 and ABID97_RS14450 are separated by 262 nucleotidesABID97_RS14450 and ABID97_RS14455 are separated by 27 nucleotidesABID97_RS14455 and ABID97_RS14460 are separated by 30 nucleotides ABID97_RS14440: ABID97_RS14440 - PhoX family phosphatase, at 2,997,862 to 2,999,715 _RS14440 ABID97_RS14445: ABID97_RS14445 - crotonase/enoyl-CoA hydratase family protein, at 2,999,815 to 3,000,642 _RS14445 ABID97_RS14450: ABID97_RS14450 - hypothetical protein, at 3,000,905 to 3,001,219 _RS14450 ABID97_RS14455: ABID97_RS14455 - DSD1 family PLP-dependent enzyme, at 3,001,247 to 3,002,389 _RS14455 ABID97_RS14460: ABID97_RS14460 - hypothetical protein, at 3,002,420 to 3,002,734 _RS14460
Group Condition ABID97_RS14440 ABID97_RS14445 ABID97_RS14450 ABID97_RS14455 ABID97_RS14460
carbon source L-Proline (C) +0.1 +0.0 -0.6 +0.2 -1.0
phage V1_1 -0.1 +0.1 -0.3 -0.0 -0.7
phage V1_10 -0.0 +0.0 +0.2 -0.1 -1.1
carbon source D-Glucose (C) +0.0 +0.0 -0.4 -0.4 -0.3
carbon source L-Alanine (C) -0.2 +0.0 +0.1 +0.1 -0.8
carbon source D-Galactose (C) +0.1 +0.0 -0.4 +0.2 -0.6
carbon source L-Alanine (C) +0.0 +0.2 -0.2 +0.2 -0.8
carbon source L-Proline (C) +0.1 +0.2 -0.3 -0.0 -0.5
carbon source L-Tryptophan (C) +0.1 +0.4 -0.5 -0.1 -0.4
phage V2_10 -0.1 -0.1 +0.3 -0.0 -0.5
phage V2_100 +0.1 +0.5 -0.2 +0.1 -0.8
carbon source acetate (C) +0.2 +0.3 -0.3 +0.3 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.5 -0.0 +0.2 -0.9
carbon source Tween 20 (C) +0.1 -0.3 -0.3 -0.1 +0.3
carbon source D-Xylose (C) +0.0 +0.3 -0.3 +0.2 -0.3
carbon source L-Histidine (C) +0.0 -0.4 -0.4 +0.1 +0.7
carbon source L-Glutamine (C) -0.1 +0.2 +0.2 -0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 +0.1 +0.4 -0.3
carbon source propionate (C) +0.1 -0.4 +0.3 +0.3 +0.2
carbon source D-Ribose (C) +0.1 +0.6 -0.2 -0.1 +0.1
carbon source propionate (C) +0.1 -0.2 +0.1 +0.0 +0.6
carbon source butyrate (C) -0.2 -0.3 +0.0 +0.2 +0.9
carbon source Glucuronamide (C) -0.1 +0.2 -0.2 +0.2 +0.7
carbon source Adenine (C) +0.0 -0.2 -0.1 +0.3 +1.0
carbon source L-Lactate (C) +0.1 +0.0 +0.1 +0.2 +0.7
carbon source D,L-Malic Acid (C) +0.2 +0.7 -0.0 +0.0 +0.4
carbon source pyruvate (C) +0.1 +0.3 +0.1 +0.1 +0.5
carbon source D-Fructose (C) +0.1 +0.1 +0.1 +0.1 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.4 +0.1 +0.2 +0.5
carbon source butyrate (C) +0.2 +0.3 +0.1 +0.1 +0.8
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ABID97_RS14440
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