Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS14400 and ABID97_RS14405 are separated by 22 nucleotidesABID97_RS14405 and ABID97_RS14410 are separated by 29 nucleotidesABID97_RS14410 and ABID97_RS14415 are separated by 77 nucleotidesABID97_RS14415 and ABID97_RS14420 are separated by 3 nucleotides ABID97_RS14400: ABID97_RS14400 - YgiQ family radical SAM protein, at 2,990,353 to 2,992,728 _RS14400 ABID97_RS14405: ABID97_RS14405 - tautomerase family protein, at 2,992,751 to 2,993,134 _RS14405 ABID97_RS14410: ABID97_RS14410 - cold shock and DUF1294 domain-containing protein, at 2,993,164 to 2,993,838 _RS14410 ABID97_RS14415: ABID97_RS14415 - hypothetical protein, at 2,993,916 to 2,994,836 _RS14415 ABID97_RS14420: ABID97_RS14420 - CoA transferase, at 2,994,840 to 2,995,718 _RS14420
Group Condition ABID97_RS14400 ABID97_RS14405 ABID97_RS14410 ABID97_RS14415 ABID97_RS14420
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -0.1 -0.3 -0.4 -0.3
carbon source L-Arabinose (C) -0.3 -0.0 -0.2 -0.0 +0.1
phage V2_100 +0.2 -0.4 -0.1 +0.0 -0.2
phage V1_10 -0.0 -0.3 +0.2 -0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.3 -0.3 +0.4 +0.2
carbon source propionate (C) -0.1 -0.2 -0.1 -0.1 +0.3
carbon source L-Histidine (C) -0.2 -0.1 +0.3 -0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.1 -0.2 -0.2 +0.1
carbon source butyrate (C) -0.1 -0.3 -0.1 +0.1 +0.3
phage V2_10 -0.0 -0.1 +0.3 -0.0 -0.2
r2a outgrowth control R2A outgrowth control -0.0 +0.3 -0.4 +0.0 +0.0
carbon source D,L-Malic Acid (C) -0.0 -0.1 -0.4 +0.1 +0.3
carbon source D,L-Malic Acid (C) -0.2 +0.1 +0.4 -0.2 -0.0
carbon source D-Sorbitol (C) -0.1 -0.2 +0.3 +0.1 +0.0
carbon source L-Glutamic (C) -0.2 +0.1 +0.3 -0.0 -0.0
plant outgrowth control Plant outgrowth control +0.0 -0.1 +0.3 -0.1 +0.2
carbon source L-Arabinose (C) -0.1 -0.0 +0.3 -0.0 +0.2
carbon source L-Phenylalanine (C) -0.2 +0.1 +0.4 +0.1 -0.1
carbon source D-Galactose (C) -0.1 +0.1 +0.2 +0.1 +0.2
carbon source L-Asparagine (C) -0.2 +0.0 +0.5 +0.1 -0.0
carbon source D-Glucuronic Acid (C) -0.1 +0.1 -0.3 +0.1 +0.6
carbon source L-Tryptophan (C) +0.0 -0.1 +0.4 +0.1 +0.1
carbon source L-Phenylalanine (C) -0.2 +0.2 +0.5 +0.0 +0.0
carbon source Gly-Glu (C) -0.0 -0.1 +0.5 -0.0 +0.1
carbon source acetate (C) -0.0 +0.1 +0.3 +0.1 +0.2
carbon source propionate (C) +0.0 +0.1 +0.2 +0.2 +0.2
carbon source L-Threonine (C) +0.1 +0.2 +0.3 +0.0 +0.2
carbon source L-Lactate (C) +0.0 +0.2 +0.3 +0.2 +0.1
carbon source Ethanol (C) +0.1 +0.1 +0.5 +0.1 +0.0
carbon source Glucuronamide (C) +0.0 +0.3 +0.5 +0.1 +0.0
remove
ABID97_RS14400
plot		 remove
ABID97_RS14405
plot		 remove
ABID97_RS14410		 remove
ABID97_RS14415
plot		 remove
ABID97_RS14420
plot