Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS14390 and ABID97_RS14395 overlap by 14 nucleotidesABID97_RS14395 and ABID97_RS14400 are separated by 141 nucleotidesABID97_RS14400 and ABID97_RS14405 are separated by 22 nucleotidesABID97_RS14405 and ABID97_RS14410 are separated by 29 nucleotides ABID97_RS14390: ABID97_RS14390 - tripartite tricarboxylate transporter permease, at 2,987,760 to 2,989,265 _RS14390 ABID97_RS14395: ABID97_RS14395 - helix-turn-helix domain-containing GNAT family N-acetyltransferase, at 2,989,252 to 2,990,211 _RS14395 ABID97_RS14400: ABID97_RS14400 - YgiQ family radical SAM protein, at 2,990,353 to 2,992,728 _RS14400 ABID97_RS14405: ABID97_RS14405 - tautomerase family protein, at 2,992,751 to 2,993,134 _RS14405 ABID97_RS14410: ABID97_RS14410 - cold shock and DUF1294 domain-containing protein, at 2,993,164 to 2,993,838 _RS14410
Group Condition ABID97_RS14390 ABID97_RS14395 ABID97_RS14400 ABID97_RS14405 ABID97_RS14410
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.6 -0.3 -0.3 -0.3
carbon source L-Arabinose (C) -0.2 -0.0 -0.3 -0.0 -0.2
carbon source D-Glucuronic Acid (C) -0.3 -0.1 -0.1 +0.1 -0.3
carbon source Tween 20 (C) -0.1 -0.2 +0.0 -0.0 -0.4
carbon source L-tyrosine (C) +0.1 -0.2 -0.2 -0.1 +0.0
carbon source L-Glutamine (C) -0.2 -0.4 +0.1 +0.0 +0.1
carbon source L-Alanine (C) -0.1 +0.2 -0.0 -0.4 +0.0
carbon source L-Threonine (C) +0.0 -0.4 +0.1 -0.0 +0.2
carbon source D,L-Malic Acid (C) -0.2 -0.2 -0.2 +0.1 +0.4
carbon source L-tyrosine (C) +0.1 -0.4 -0.1 +0.0 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.2 +0.0 -0.1 -0.3
carbon source L-Histidine (C) -0.0 -0.1 -0.2 -0.1 +0.3
phage V1_10 -0.1 +0.2 -0.0 -0.3 +0.2
phage V2_10 -0.3 +0.1 -0.0 +0.1 +0.1
carbon source L-Glutamic (C) -0.1 -0.1 -0.2 +0.1 +0.3
carbon source L-Phenylalanine (C) -0.1 -0.1 -0.2 +0.1 +0.4
carbon source pyruvate (C) -0.1 -0.1 -0.1 +0.1 +0.3
carbon source Tween 20 (C) +0.4 -0.2 -0.0 +0.0 +0.1
carbon source L-Phenylalanine (C) +0.0 -0.2 -0.2 +0.2 +0.5
carbon source L-Threonine (C) -0.1 -0.1 +0.1 +0.2 +0.3
carbon source Gly-Glu (C) +0.1 -0.2 -0.0 -0.1 +0.5
r2a outgrowth control R2A outgrowth control +0.3 -0.2 +0.0 +0.1 +0.2
phage V2_100 +0.2 +0.5 +0.2 -0.4 -0.1
carbon source L-Asparagine (C) +0.2 -0.0 -0.2 +0.0 +0.5
carbon source Ethanol (C) +0.0 -0.2 +0.1 +0.1 +0.5
plant outgrowth control Plant outgrowth control +0.3 +0.2 +0.0 -0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.2 +0.2 +0.1 -0.2
carbon source L-Lactate (C) +0.2 +0.1 +0.0 +0.2 +0.3
carbon source Glucuronamide (C) -0.0 +0.0 +0.0 +0.3 +0.5
carbon source a-Ketoglutaric (C) +0.3 +0.0 +0.0 +0.2 +0.3
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ABID97_RS14390
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ABID97_RS14395
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ABID97_RS14405
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ABID97_RS14410
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