Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS14350 and ABID97_RS14355 are separated by 82 nucleotidesABID97_RS14355 and ABID97_RS14360 overlap by 4 nucleotidesABID97_RS14360 and ABID97_RS14365 are separated by 134 nucleotidesABID97_RS14365 and ABID97_RS14370 are separated by 49 nucleotides ABID97_RS14350: ABID97_RS14350 - chromate transporter, at 2,981,230 to 2,981,820 _RS14350 ABID97_RS14355: ABID97_RS14355 - YihY/virulence factor BrkB family protein, at 2,981,903 to 2,982,826 _RS14355 ABID97_RS14360: ABID97_RS14360 - DUF924 family protein, at 2,982,823 to 2,983,374 _RS14360 ABID97_RS14365: ABID97_RS14365 - CHRD domain-containing protein, at 2,983,509 to 2,983,958 _RS14365 ABID97_RS14370: ABID97_RS14370 - patatin-like phospholipase family protein, at 2,984,008 to 2,985,213 _RS14370
Group Condition ABID97_RS14350 ABID97_RS14355 ABID97_RS14360 ABID97_RS14365 ABID97_RS14370
carbon source propionate (C) -0.2 -0.1 N.D. -0.4 -0.2
carbon source D,L-Malic Acid (C) -0.5 -0.2 N.D. +0.0 -0.1
carbon source L-tyrosine (C) -0.0 -0.1 N.D. -0.6 +0.0
carbon source L-Leucine (C) -0.3 -0.1 N.D. +0.2 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.7 N.D. -0.0 -0.1
carbon source D-Arabinose (C) -0.5 -0.0 N.D. +0.2 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.3 N.D. -0.1 +0.1
carbon source propionate (C) +0.1 -0.1 N.D. -0.3 +0.1
phage V2_100 -0.3 -0.1 N.D. -0.0 +0.3
carbon source D-Serine (C) -0.3 +0.1 N.D. +0.2 -0.1
carbon source D-Xylose (C) -0.2 +0.1 N.D. -0.1 +0.2
carbon source casaminos (C) +0.1 -0.0 N.D. -0.3 +0.2
carbon source L-Glutamine (C) -0.2 -0.1 N.D. +0.5 -0.1
carbon source Adenine (C) +0.2 +0.2 N.D. -0.4 +0.2
carbon source Fumarate (C) -0.2 +0.0 N.D. +0.2 +0.2
carbon source Glucuronamide (C) +0.2 +0.1 N.D. +0.2 -0.2
carbon source D-Ribose (C) -0.3 +0.1 N.D. +0.3 +0.1
carbon source L-Proline (C) -0.2 +0.1 N.D. +0.3 +0.1
carbon source L-Histidine (C) -0.1 -0.1 N.D. +0.4 +0.1
carbon source D-Glucose (C) -0.2 +0.1 N.D. +0.3 +0.1
phage V1_1 -0.1 -0.0 N.D. +0.4 +0.1
carbon source a-Ketoglutaric (C) -0.0 +0.5 N.D. -0.1 +0.1
carbon source D-Serine (C) +0.2 +0.2 N.D. +0.3 -0.0
carbon source L-Fucose (C) +0.1 +0.2 N.D. +0.3 +0.2
carbon source D,L-Malic Acid (C) +0.2 -0.2 N.D. +0.6 +0.2
carbon source L-Histidine (C) +0.0 +0.1 N.D. +0.4 +0.3
carbon source a-Ketoglutaric (C) +0.1 +0.4 N.D. +0.4 +0.1
carbon source Glucuronamide (C) +0.5 +0.0 N.D. +0.4 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.4 N.D. +0.5 +0.2
carbon source butyrate (C) +0.4 +0.0 N.D. +0.1 +0.4
remove
ABID97_RS14350
plot		 remove
ABID97_RS14355
plot		 remove
ABID97_RS14360		 remove
ABID97_RS14365
plot		 remove
ABID97_RS14370
plot