Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS14210 and ABID97_RS14215 are separated by 4 nucleotidesABID97_RS14215 and ABID97_RS14220 overlap by 8 nucleotidesABID97_RS14220 and ABID97_RS14225 overlap by 4 nucleotidesABID97_RS14225 and ABID97_RS14230 are separated by 15 nucleotides ABID97_RS14210: ABID97_RS14210 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 2,955,932 to 2,957,083 _RS14210 ABID97_RS14215: ABID97_RS14215 - type IV pilus biogenesis/stability protein PilW, at 2,957,088 to 2,957,942 _RS14215 ABID97_RS14220: ABID97_RS14220 - helix-turn-helix domain-containing protein, at 2,957,935 to 2,958,909 _RS14220 ABID97_RS14225: ABID97_RS14225 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 2,958,906 to 2,960,183 _RS14225 ABID97_RS14230: ABID97_RS14230 - histidine--tRNA ligase, at 2,960,199 to 2,961,509 _RS14230
Group Condition ABID97_RS14210 ABID97_RS14215 ABID97_RS14220 ABID97_RS14225 ABID97_RS14230
carbon source D-Gluconic Acid (C) -0.0 -1.6 N.D. N.D. N.D.
carbon source succinate (C) -0.1 -1.2 N.D. N.D. N.D.
carbon source succinate (C) -0.2 -1.0 N.D. N.D. N.D.
carbon source Gly-Glu (C) -0.5 -0.7 N.D. N.D. N.D.
carbon source L-Glutamine (C) -0.2 -1.0 N.D. N.D. N.D.
carbon source Adenine (C) -0.6 -0.5 N.D. N.D. N.D.
carbon source L-Lactate (C) -0.4 -0.7 N.D. N.D. N.D.
carbon source Gly-Glu (C) +0.1 -1.0 N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) +0.1 -1.0 N.D. N.D. N.D.
carbon source L-tyrosine (C) +0.5 -0.6 N.D. N.D. N.D.
carbon source L-Threonine (C) -0.3 +0.9 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.8 N.D. N.D. N.D.
carbon source D-Glucuronic Acid (C) +0.0 +1.1 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) +0.3 +0.9 N.D. N.D. N.D.
carbon source Ethanol (C) +0.6 +0.7 N.D. N.D. N.D.
carbon source D-Glucose (C) +0.1 +1.3 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) -0.4 +1.9 N.D. N.D. N.D.
carbon source D-Glucose (C) -0.3 +1.7 N.D. N.D. N.D.
carbon source D-Xylose (C) +0.5 +0.9 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) -0.3 +1.9 N.D. N.D. N.D.
carbon source D-Xylose (C) +0.6 +1.1 N.D. N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.3 +1.6 N.D. N.D. N.D.
carbon source L-tyrosine (C) +0.4 +1.5 N.D. N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.5 +1.7 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +1.0 +1.9 N.D. N.D. N.D.
phage V1_10 +2.1 +2.8 N.D. N.D. N.D.
phage V2_10 +2.1 +3.1 N.D. N.D. N.D.
phage V2_10 +2.1 +3.2 N.D. N.D. N.D.
phage V1_10 +2.4 +3.3 N.D. N.D. N.D.
phage V2_100 +4.4 +6.5 N.D. N.D. N.D.
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ABID97_RS14210
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ABID97_RS14215
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ABID97_RS14225
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ABID97_RS14230
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