Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS14180 and ABID97_RS14185 are separated by 77 nucleotidesABID97_RS14185 and ABID97_RS14190 are separated by 56 nucleotidesABID97_RS14190 and ABID97_RS14195 are separated by 126 nucleotidesABID97_RS14195 and ABID97_RS14200 overlap by 4 nucleotides ABID97_RS14180: ABID97_RS14180 - ATP-dependent DNA helicase, at 2,948,542 to 2,950,602 _RS14180 ABID97_RS14185: ABID97_RS14185 - outer membrane protein assembly factor BamD, at 2,950,680 to 2,951,486 _RS14185 ABID97_RS14190: ABID97_RS14190 - RluA family pseudouridine synthase, at 2,951,543 to 2,952,526 _RS14190 ABID97_RS14195: ABID97_RS14195 - SMC-Scp complex subunit ScpB, at 2,952,653 to 2,953,531 _RS14195 ABID97_RS14200: ABID97_RS14200 - pseudouridine synthase, at 2,953,528 to 2,955,336 _RS14200
Group Condition ABID97_RS14180 ABID97_RS14185 ABID97_RS14190 ABID97_RS14195 ABID97_RS14200
carbon source Gly-Glu (C) -0.4 N.D. +0.8 N.D. -1.8
carbon source D-Glucose (C) -0.3 N.D. +1.1 N.D. -1.7
carbon source pyruvate (C) +0.0 N.D. +0.8 N.D. -1.6
carbon source D-Glucose (C) +0.0 N.D. +1.4 N.D. -1.9
carbon source Gly-Glu (C) -0.1 N.D. +1.3 N.D. -1.5
carbon source L-Histidine (C) +0.1 N.D. +1.5 N.D. -1.9
carbon source casaminos (C) -0.1 N.D. +1.0 N.D. -1.2
carbon source D-Ribose (C) -0.0 N.D. +1.4 N.D. -1.4
carbon source D,L-Lactate (C) +0.1 N.D. +1.0 N.D. -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. +1.2 N.D. -1.0
carbon source D-Galactose (C) +0.2 N.D. +1.3 N.D. -1.4
carbon source L-Malic (C) +0.2 N.D. +1.2 N.D. -1.2
carbon source D,L-Lactate (C) +0.2 N.D. +1.3 N.D. -1.2
carbon source D-Mannose (C) -0.2 N.D. +1.8 N.D. -1.2
carbon source D-Mannose (C) -0.0 N.D. +1.8 N.D. -1.2
carbon source D-Serine (C) -0.2 N.D. +1.6 N.D. -0.7
carbon source L-Histidine (C) +0.2 N.D. +2.3 N.D. -1.7
carbon source butyrate (C) -0.1 N.D. +1.6 N.D. -0.7
carbon source Glycolic Acid (C) +0.1 N.D. +1.5 N.D. -0.7
carbon source Tween 20 (C) +0.2 N.D. +1.5 N.D. -0.7
carbon source L-Alanine (C) +0.1 N.D. +1.6 N.D. -0.6
carbon source L-Fucose (C) -0.1 N.D. +1.7 N.D. -0.6
carbon source Glucuronamide (C) -0.3 N.D. +1.8 N.D. -0.4
carbon source D-Gluconic Acid (C) +0.1 N.D. +2.6 N.D. -1.5
carbon source D,L-Malic Acid (C) -0.1 N.D. +2.6 N.D. -0.9
carbon source D-Gluconic Acid (C) -0.0 N.D. +2.8 N.D. -1.1
carbon source D-Glucuronic Acid (C) +0.0 N.D. +3.1 N.D. -1.3
carbon source L-Threonine (C) -0.0 N.D. +2.7 N.D. -0.6
carbon source L-Threonine (C) -0.2 N.D. +3.3 N.D. -0.7
phage V2_100 +0.1 N.D. +1.1 N.D. +2.5
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ABID97_RS14180
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ABID97_RS14185
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ABID97_RS14200
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