Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13905 and ABID97_RS13910 are separated by 469 nucleotidesABID97_RS13910 and ABID97_RS13915 are separated by 83 nucleotidesABID97_RS13915 and ABID97_RS13920 are separated by 145 nucleotidesABID97_RS13920 and ABID97_RS13925 are separated by 5 nucleotides ABID97_RS13905: ABID97_RS13905 - DNA cytosine methyltransferase, at 2,885,928 to 2,888,129 _RS13905 ABID97_RS13910: ABID97_RS13910 - tyrosine-type recombinase/integrase, at 2,888,599 to 2,889,699 _RS13910 ABID97_RS13915: ABID97_RS13915 - tRNA dihydrouridine(20/20a) synthase DusA, at 2,889,783 to 2,890,823 _RS13915 ABID97_RS13920: ABID97_RS13920 - IclR family transcriptional regulator, at 2,890,969 to 2,891,754 _RS13920 ABID97_RS13925: ABID97_RS13925 - GntR family transcriptional regulator, at 2,891,760 to 2,892,407 _RS13925
Group Condition ABID97_RS13905 ABID97_RS13910 ABID97_RS13915 ABID97_RS13920 ABID97_RS13925
carbon source L-Threonine (C) N.D. -1.0 +0.0 -0.4 -0.5
carbon source L-Threonine (C) N.D. -1.1 +0.0 -0.3 -0.1
phage V2_10 N.D. +0.1 -0.2 -1.2 +0.1
phage V1_10 N.D. +0.1 +0.0 -1.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.0 -0.6 +0.3 -0.7
phage V1_10 N.D. +0.1 -0.1 -1.0 -0.1
phage V2_100 N.D. +0.3 -0.2 -1.3 +0.3
carbon source D,L-Malic Acid (C) N.D. -0.4 -0.2 +0.6 -0.8
carbon source Adenine (C) N.D. +0.0 -0.7 +0.3 -0.3
phage V2_10 N.D. +0.1 +0.1 -1.0 +0.1
carbon source L-Leucine (C) N.D. +0.0 +0.1 +0.5 -1.2
carbon source L-Leucine (C) N.D. -0.1 +0.2 +0.3 -0.8
carbon source L-Tryptophan (C) N.D. +0.1 +0.1 +0.5 -0.8
carbon source L-Tryptophan (C) N.D. +0.0 +0.2 +0.8 -0.7
carbon source L-tyrosine (C) N.D. -0.0 -0.4 +0.5 +0.5
carbon source L-Phenylalanine (C) N.D. +0.1 +0.3 +0.8 -0.3
carbon source D-Arabinose (C) N.D. -0.1 -0.0 +0.4 +0.7
carbon source L-Histidine (C) N.D. +0.1 +0.5 +0.7 -0.3
carbon source L-Phenylalanine (C) N.D. +0.1 +0.4 +1.0 -0.4
carbon source D-Arabinose (C) N.D. -0.1 +0.0 +0.7 +0.5
carbon source butyrate (C) N.D. -0.2 +0.1 +0.6 +0.8
carbon source L-Malic (C) N.D. +0.1 +0.3 +0.6 +0.4
carbon source D-Glucuronic Acid (C) N.D. +0.1 +0.6 +0.9 -0.0
carbon source D-Glucose (C) N.D. +0.1 +0.4 +0.9 +0.3
carbon source L-Malic (C) N.D. -0.0 +0.1 +1.0 +0.5
carbon source D-Glucose (C) N.D. +0.1 +0.0 +0.9 +0.7
carbon source D,L-Malic Acid (C) N.D. -0.0 -0.1 +0.2 +1.9
carbon source butyrate (C) N.D. +0.0 +0.4 +0.7 +1.0
carbon source D-Gluconic Acid (C) N.D. +0.0 +0.3 +1.0 +0.8
carbon source D-Gluconic Acid (C) N.D. +0.1 +0.2 +1.3 +0.7
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ABID97_RS13910
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