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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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500 nt
ABID97_RS13820 and ABID97_RS13825 overlap by 1 nucleotides
ABID97_RS13825 and ABID97_RS13830 are separated by 10 nucleotides
ABID97_RS13830 and ABID97_RS13835 are separated by 107 nucleotides
ABID97_RS13835 and ABID97_RS13840 are separated by 2 nucleotides
ABID97_RS13820: ABID97_RS13820 - head-tail joining protein, at 2,869,298 to 2,869,582
_RS13820
ABID97_RS13825: ABID97_RS13825 - hypothetical protein, at 2,869,582 to 2,869,995
_RS13825
ABID97_RS13830: ABID97_RS13830 - hypothetical protein, at 2,870,006 to 2,870,791
_RS13830
ABID97_RS13835: ABID97_RS13835 - phage tail tape measure protein, at 2,870,899 to 2,873,619
_RS13835
ABID97_RS13840: ABID97_RS13840 - hypothetical protein, at 2,873,622 to 2,874,017
_RS13840
Group
Condition
ABID97
_RS13820
ABID97
_RS13825
ABID97
_RS13830
ABID97
_RS13835
ABID97
_RS13840
carbon source
L-Histidine (C)
N.D.
N.D.
-0.2
-1.1
N.D.
carbon source
acetate (C)
N.D.
N.D.
-0.7
-0.6
N.D.
carbon source
L-Threonine (C)
N.D.
N.D.
-0.4
-0.9
N.D.
carbon source
L-Leucine (C)
N.D.
N.D.
-0.3
-0.9
N.D.
carbon source
Tween 20 (C)
N.D.
N.D.
-0.5
-0.7
N.D.
carbon source
D-Galactose (C)
N.D.
N.D.
-0.3
-0.8
N.D.
plant outgrowth control
Plant outgrowth control
N.D.
N.D.
-0.5
-0.6
N.D.
carbon source
L-Phenylalanine (C)
N.D.
N.D.
-0.6
-0.4
N.D.
carbon source
L-Glutamic (C)
N.D.
N.D.
-0.5
-0.5
N.D.
plant outgrowth control
Plant outgrowth control
N.D.
N.D.
-0.3
-0.7
N.D.
carbon source
L-Arabinose (C)
N.D.
N.D.
-0.2
-0.8
N.D.
carbon source
Fumarate (C)
N.D.
N.D.
-0.5
-0.4
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
-0.4
-0.6
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
-0.4
-0.5
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
N.D.
-0.3
-0.6
N.D.
carbon source
L-tyrosine (C)
N.D.
N.D.
-0.6
-0.3
N.D.
carbon source
D-Serine (C)
N.D.
N.D.
-0.5
-0.5
N.D.
r2a outgrowth control
R2A outgrowth control
N.D.
N.D.
-0.2
-0.7
N.D.
carbon source
Glucuronamide (C)
N.D.
N.D.
-0.2
-0.7
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
-0.3
-0.6
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
-0.4
-0.5
N.D.
carbon source
L-Alanine (C)
N.D.
N.D.
-0.5
-0.4
N.D.
carbon source
D-Sorbitol (C)
N.D.
N.D.
-0.5
-0.4
N.D.
carbon source
D-Xylose (C)
N.D.
N.D.
-0.3
-0.6
N.D.
carbon source
L-Histidine (C)
N.D.
N.D.
-0.4
-0.4
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
N.D.
-0.3
-0.5
N.D.
carbon source
Gly-Glu (C)
N.D.
N.D.
-0.4
-0.4
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
N.D.
N.D.
+0.1
-0.7
N.D.
carbon source
propionate (C)
N.D.
N.D.
-0.7
+0.3
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
N.D.
N.D.
-0.6
+0.3
N.D.
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