Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13640 and ABID97_RS13645 overlap by 4 nucleotidesABID97_RS13645 and ABID97_RS13650 overlap by 4 nucleotidesABID97_RS13650 and ABID97_RS13655 are separated by 10 nucleotidesABID97_RS13655 and ABID97_RS13660 overlap by 4 nucleotides ABID97_RS13640: ABID97_RS13640 - [NiFe]-hydrogenase assembly chaperone HybE, at 2,841,902 to 2,842,447 _RS13640 ABID97_RS13645: ABID97_RS13645 - rubredoxin, at 2,842,444 to 2,842,686 _RS13645 ABID97_RS13650: ABID97_RS13650 - hydrogenase expression/formation protein, at 2,842,683 to 2,843,549 _RS13650 ABID97_RS13655: ABID97_RS13655 - hydrogenase, at 2,843,560 to 2,844,063 _RS13655 ABID97_RS13660: ABID97_RS13660 - HypC/HybG/HupF family hydrogenase formation chaperone, at 2,844,060 to 2,844,404 _RS13660
Group Condition ABID97_RS13640 ABID97_RS13645 ABID97_RS13650 ABID97_RS13655 ABID97_RS13660
carbon source L-tyrosine (C) N.D. -0.8 -0.2 N.D. N.D.
phage V1_1 N.D. -0.3 -0.6 N.D. N.D.
carbon source D-Glucose (C) N.D. -0.5 -0.2 N.D. N.D.
carbon source Glucuronamide (C) N.D. -0.3 -0.3 N.D. N.D.
phage V2_100 N.D. -0.2 -0.4 N.D. N.D.
phage V2_1 N.D. -0.3 -0.3 N.D. N.D.
carbon source L-Leucine (C) N.D. -0.4 -0.2 N.D. N.D.
carbon source casaminos (C) N.D. -0.3 -0.3 N.D. N.D.
phage V2_10 N.D. -0.3 -0.3 N.D. N.D.
phage V1_10 N.D. -0.1 -0.4 N.D. N.D.
carbon source acetate (C) N.D. -0.5 -0.1 N.D. N.D.
carbon source Formate (C) N.D. -0.5 +0.2 N.D. N.D.
carbon source D-Galactose (C) N.D. +0.4 -0.6 N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. -0.3 +0.3 N.D. N.D.
carbon source L-Glutamic (C) N.D. -0.4 +0.4 N.D. N.D.
carbon source D-Mannose (C) N.D. -0.3 +0.4 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. +0.4 -0.3 N.D. N.D.
carbon source D-Gluconic Acid (C) N.D. -0.2 +0.4 N.D. N.D.
carbon source Ethanol (C) N.D. -0.2 +0.6 N.D. N.D.
plant outgrowth control Plant outgrowth control N.D. +0.5 -0.1 N.D. N.D.
carbon source L-Alanine (C) N.D. +0.4 +0.1 N.D. N.D.
carbon source L-Fucose (C) N.D. +0.2 +0.5 N.D. N.D.
carbon source Adenine (C) N.D. +0.1 +0.6 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. +0.6 +0.0 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.0 +0.7 N.D. N.D.
carbon source D-Ribose (C) N.D. +0.6 +0.2 N.D. N.D.
plant outgrowth control Plant outgrowth control N.D. +0.3 +0.5 N.D. N.D.
carbon source L-Alanine (C) N.D. +0.8 +0.1 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.8 +0.1 N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.6 +0.6 N.D. N.D.
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