Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13525 and ABID97_RS13530 are separated by 22 nucleotidesABID97_RS13530 and ABID97_RS13535 are separated by 804 nucleotidesABID97_RS13535 and ABID97_RS13540 are separated by 38 nucleotidesABID97_RS13540 and ABID97_RS13545 are separated by 52 nucleotides ABID97_RS13525: ABID97_RS13525 - DUF1302 family protein, at 2,816,147 to 2,817,829 _RS13525 ABID97_RS13530: ABID97_RS13530 - DUF1329 domain-containing protein, at 2,817,852 to 2,819,222 _RS13530 ABID97_RS13535: ABID97_RS13535 - aldehyde dehydrogenase, at 2,820,027 to 2,821,505 _RS13535 ABID97_RS13540: ABID97_RS13540 - FAD-dependent oxidoreductase, at 2,821,544 to 2,823,007 _RS13540 ABID97_RS13545: ABID97_RS13545 - ABC transporter substrate-binding protein, at 2,823,060 to 2,824,259 _RS13545
Group Condition ABID97_RS13525 ABID97_RS13530 ABID97_RS13535 ABID97_RS13540 ABID97_RS13545
carbon source L-Alanine (C) +0.0 +0.1 -0.9 -0.3 +0.1
phage V2_100 -0.6 -0.0 -0.3 -0.2 +0.2
carbon source D-Fructose (C) +0.1 -0.6 -0.2 -0.2 +0.2
carbon source D,L-Malic Acid (C) +0.6 -0.2 -0.7 -0.1 -0.3
carbon source L-Arabinose (C) -0.6 +0.2 -0.2 +0.2 -0.2
plant outgrowth control Plant outgrowth control -0.8 -0.0 -0.0 +0.4 -0.0
carbon source L-Glutamine (C) -0.4 -0.3 -0.3 +0.3 +0.1
carbon source D-Gluconic Acid (C) +0.2 +0.1 -0.7 -0.2 +0.1
carbon source D-Fructose (C) -0.1 +0.4 -0.2 -0.1 -0.5
r2a outgrowth control R2A outgrowth control -0.3 +0.2 -0.2 +0.2 -0.3
carbon source L-Histidine (C) +0.0 -0.8 +0.3 -0.1 +0.3
r2a outgrowth control R2A outgrowth control -0.5 -0.3 +0.2 +0.2 +0.1
carbon source a-Ketoglutaric (C) +0.2 -0.2 -0.5 +0.3 -0.1
carbon source D,L-Malic Acid (C) +0.0 +0.4 -0.6 +0.1 -0.1
carbon source L-Lactate (C) +0.2 -0.1 -0.6 +0.0 +0.4
carbon source Glycolic Acid (C) +0.2 +0.3 -0.5 -0.2 +0.1
carbon source Ethanol (C) +0.5 +0.1 -0.5 -0.2 -0.1
carbon source propionate (C) +0.7 -1.0 -0.1 -0.3 +0.8
phage V2_10 +0.0 -0.2 +0.3 -0.4 +0.3
carbon source Glucuronamide (C) +0.3 +0.5 -0.7 +0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 +0.6 +0.2 +0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 -0.3 -0.2 +0.1 -0.0
carbon source casaminos (C) -0.2 +0.6 -0.4 +0.4 -0.0
carbon source L-Glutamine (C) +0.6 +0.3 +0.0 -0.0 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.6 +0.3 +0.7 -0.4
carbon source L-tyrosine (C) +0.4 +0.6 +0.1 -0.2 -0.0
carbon source D-Serine (C) +0.4 +0.3 -0.0 +0.1 +0.4
carbon source Glucuronamide (C) +0.4 +0.2 +0.2 +0.1 +0.3
phage V1_1 +0.0 +0.2 +0.6 +0.1 +0.3
carbon source propionate (C) +0.1 +0.0 -0.2 +1.5 +1.2
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