Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13470 and ABID97_RS13475 are separated by 22 nucleotidesABID97_RS13475 and ABID97_RS13480 overlap by 89 nucleotidesABID97_RS13480 and ABID97_RS13485 are separated by 32 nucleotidesABID97_RS13485 and ABID97_RS13490 are separated by 135 nucleotides ABID97_RS13470: ABID97_RS13470 - Rieske 2Fe-2S domain-containing protein, at 2,803,967 to 2,804,314 _RS13470 ABID97_RS13475: ABID97_RS13475 - MFS transporter, at 2,804,337 to 2,805,515 _RS13475 ABID97_RS13480: ABID97_RS13480 - FAD-dependent monooxygenase, at 2,805,427 to 2,806,647 _RS13480 ABID97_RS13485: ABID97_RS13485 - LysR family transcriptional regulator, at 2,806,680 to 2,807,597 _RS13485 ABID97_RS13490: ABID97_RS13490 - dihydrodipicolinate synthase family protein, at 2,807,733 to 2,808,752 _RS13490
Group Condition ABID97_RS13470 ABID97_RS13475 ABID97_RS13480 ABID97_RS13485 ABID97_RS13490
carbon source D,L-Malic Acid (C) -0.5 N.D. -0.4 N.D. -0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.6 N.D. -1.0 N.D. +0.1
carbon source D-Ribose (C) +0.1 N.D. -1.6 N.D. +0.1
carbon source propionate (C) -0.9 N.D. +0.2 N.D. -0.7
carbon source D,L-Malic Acid (C) -1.0 N.D. -0.4 N.D. +0.0
carbon source D-Gluconic Acid (C) -0.6 N.D. -0.4 N.D. -0.4
carbon source L-Leucine (C) -0.1 N.D. -0.5 N.D. -0.6
carbon source D-Fructose (C) -0.0 N.D. -0.7 N.D. -0.5
carbon source Glycolic Acid (C) -0.5 N.D. -0.2 N.D. -0.4
carbon source succinate (C) -0.0 N.D. -0.8 N.D. -0.3
plant outgrowth control Plant outgrowth control -0.9 N.D. -0.4 N.D. +0.1
carbon source L-Histidine (C) +0.1 N.D. -1.0 N.D. -0.1
carbon source butyrate (C) -0.3 N.D. -0.5 N.D. -0.2
carbon source L-Fucose (C) +0.1 N.D. -0.6 N.D. -0.5
phage V1_1 -0.5 N.D. -0.5 N.D. -0.1
carbon source Adenine (C) -0.4 N.D. -0.3 N.D. -0.2
carbon source L-Tryptophan (C) -0.4 N.D. -0.3 N.D. -0.2
phage V1_10 +0.3 N.D. -0.4 N.D. -0.5
carbon source Glucuronamide (C) -0.1 N.D. -0.6 N.D. +0.2
carbon source D-Mannose (C) +0.3 N.D. -0.7 N.D. -0.2
carbon source D-Ribose (C) -0.5 N.D. -0.4 N.D. +0.4
carbon source L-Glutamine (C) +0.1 N.D. -0.9 N.D. +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.2 N.D. -0.7 N.D. +0.1
carbon source L-tyrosine (C) -0.7 N.D. +0.0 N.D. +0.3
carbon source Ethanol (C) -0.5 N.D. +0.4 N.D. -0.2
r2a outgrowth control R2A outgrowth control -0.6 N.D. +0.4 N.D. +0.3
phage V1_10 +0.7 N.D. +0.2 N.D. -0.7
phage V2_100 +0.4 N.D. -0.7 N.D. +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 N.D. -0.3 N.D. +0.3
carbon source D-Arabinose (C) +0.4 N.D. +0.6 N.D. +0.1
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