Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13430 and ABID97_RS13435 are separated by 229 nucleotidesABID97_RS13435 and ABID97_RS13440 are separated by 7 nucleotidesABID97_RS13440 and ABID97_RS13445 are separated by 40 nucleotidesABID97_RS13445 and ABID97_RS13450 are separated by 284 nucleotides ABID97_RS13430: ABID97_RS13430 - 3-keto-5-aminohexanoate cleavage protein, at 2,796,229 to 2,797,113 _RS13430 ABID97_RS13435: ABID97_RS13435 - fumarylacetoacetate hydrolase family protein, at 2,797,343 to 2,798,341 _RS13435 ABID97_RS13440: ABID97_RS13440 - fumarylacetoacetate hydrolase family protein, at 2,798,349 to 2,799,359 _RS13440 ABID97_RS13445: ABID97_RS13445 - cupin domain-containing protein, at 2,799,400 to 2,799,993 _RS13445 ABID97_RS13450: ABID97_RS13450 - TetR/AcrR family transcriptional regulator, at 2,800,278 to 2,800,859 _RS13450
Group Condition ABID97_RS13430 ABID97_RS13435 ABID97_RS13440 ABID97_RS13445 ABID97_RS13450
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -1.6 +0.5 N.D. -3.7
carbon source L-Histidine (C) -0.3 -0.3 -0.3 N.D. -3.7
carbon source D-Gluconic Acid (C) +0.1 -0.5 -0.3 N.D. -3.5
carbon source D-Glucose (C) +0.4 -0.3 +0.3 N.D. -4.0
carbon source L-Histidine (C) +0.1 +0.2 +0.5 N.D. -3.9
carbon source butyrate (C) -0.8 -1.0 -0.2 N.D. -0.8
carbon source D-Xylose (C) +0.1 -0.5 +0.0 N.D. -2.5
carbon source L-Alanine (C) -0.1 +0.1 -0.7 N.D. -2.0
carbon source Glycerol (C) -0.6 +0.4 -0.5 N.D. -2.0
carbon source D-Gluconic Acid (C) -0.4 +0.0 +0.0 N.D. -2.3
carbon source Tween 20 (C) -0.9 -0.5 -0.3 N.D. -0.9
carbon source L-Phenylalanine (C) -0.1 +0.1 -0.0 N.D. -2.4
carbon source D-Glucose (C) +0.1 +0.1 +0.1 N.D. -2.8
carbon source Formate (C) -0.7 -0.1 -0.3 N.D. -1.3
carbon source D-Xylose (C) +0.5 -0.2 +0.3 N.D. -3.0
carbon source L-Phenylalanine (C) +0.1 -0.2 -0.0 N.D. -2.2
carbon source L-Tryptophan (C) -0.3 -0.6 -0.2 N.D. -1.3
carbon source D-Mannose (C) -0.4 +0.5 -0.2 N.D. -2.1
carbon source 2-Deoxy-D-Ribose (C) -0.4 +0.5 +0.0 N.D. -2.3
carbon source L-Fucose (C) -0.9 +0.1 -0.4 N.D. -0.9
carbon source D-Glucuronic Acid (C) +0.3 +0.4 +0.2 N.D. -2.7
carbon source Gly-Glu (C) +0.2 -0.1 +0.2 N.D. -2.1
carbon source Tween 20 (C) +0.4 -0.4 -0.3 N.D. -1.4
carbon source Gly-Glu (C) -0.1 +0.2 +0.3 N.D. -1.7
carbon source L-Malic (C) -0.1 +0.3 +0.2 N.D. -1.8
carbon source propionate (C) -0.4 +0.2 +0.5 N.D. -1.4
carbon source L-Proline (C) +0.2 +0.2 +0.3 N.D. -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.1 +0.7 N.D. -2.2
carbon source a-Ketoglutaric (C) +0.3 +0.3 +0.4 N.D. -1.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.0 +0.7 N.D. -1.1
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