Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13385 and ABID97_RS13390 are separated by 11 nucleotidesABID97_RS13390 and ABID97_RS13395 are separated by 28 nucleotidesABID97_RS13395 and ABID97_RS13400 are separated by 8 nucleotidesABID97_RS13400 and ABID97_RS13405 are separated by 4 nucleotides ABID97_RS13385: ABID97_RS13385 - dihydrodipicolinate synthase family protein, at 2,787,528 to 2,788,547 _RS13385 ABID97_RS13390: ABID97_RS13390 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,788,559 to 2,790,034 _RS13390 ABID97_RS13395: ABID97_RS13395 - tripartite tricarboxylate transporter substrate-binding protein, at 2,790,063 to 2,791,031 _RS13395 ABID97_RS13400: ABID97_RS13400 - cupin domain-containing protein, at 2,791,040 to 2,791,621 _RS13400 ABID97_RS13405: ABID97_RS13405 - fumarylacetoacetate hydrolase family protein, at 2,791,626 to 2,792,615 _RS13405
Group Condition ABID97_RS13385 ABID97_RS13390 ABID97_RS13395 ABID97_RS13400 ABID97_RS13405
carbon source propionate (C) -0.1 -1.1 +0.0 N.D. -0.5
carbon source D-Glucuronic Acid (C) -0.3 -0.5 -0.2 N.D. -0.3
carbon source D-Serine (C) -0.3 -0.3 -0.3 N.D. -0.2
carbon source L-Phenylalanine (C) -0.5 -0.1 +0.1 N.D. -0.4
carbon source L-tyrosine (C) +0.3 -0.9 -0.0 N.D. -0.2
carbon source succinate (C) -0.3 +0.3 -0.4 N.D. -0.3
carbon source D,L-Malic Acid (C) -0.6 -0.2 -0.2 N.D. +0.3
carbon source D,L-Lactate (C) -0.2 +0.3 -0.3 N.D. -0.3
carbon source L-Arabinose (C) -0.1 +0.3 -0.3 N.D. -0.5
carbon source butyrate (C) -0.0 +0.4 -0.0 N.D. -0.6
carbon source L-Proline (C) -0.2 +0.3 +0.1 N.D. -0.4
carbon source D-Fructose (C) -0.5 +0.6 +0.1 N.D. -0.3
phage V2_1 +0.1 -0.7 +0.3 N.D. +0.2
control NP -0.5 +0.3 +0.2 N.D. -0.0
phage V2_10 +0.4 -0.5 +0.0 N.D. +0.2
carbon source casaminos (C) +0.2 +0.5 -0.3 N.D. -0.3
carbon source propionate (C) -0.1 +0.6 +0.2 N.D. -0.7
carbon source D-Xylose (C) -0.1 +0.6 -0.1 N.D. -0.3
carbon source L-Arabinose (C) -0.3 +0.6 +0.1 N.D. -0.2
carbon source Tween 20 (C) -0.1 +0.7 -0.0 N.D. -0.3
r2a outgrowth control R2A outgrowth control +0.2 -0.4 +0.1 N.D. +0.6
carbon source L-Fucose (C) -0.4 +0.9 +0.1 N.D. -0.0
carbon source D-Serine (C) +0.3 +0.7 -0.2 N.D. -0.2
carbon source L-tyrosine (C) +0.3 +0.4 -0.1 N.D. +0.2
carbon source Fumarate (C) +0.3 +0.7 -0.2 N.D. +0.1
carbon source casaminos (C) +0.4 +0.3 -0.1 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.0 +0.1 N.D. +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.7 +0.0 N.D. +0.1
plant outgrowth control Plant outgrowth control +0.3 +0.8 -0.0 N.D. +0.6
phage V2_100 +0.6 +0.9 +0.1 N.D. +0.3
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ABID97_RS13385
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ABID97_RS13390
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