Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13365 and ABID97_RS13370 are separated by 135 nucleotidesABID97_RS13370 and ABID97_RS13375 are separated by 58 nucleotidesABID97_RS13375 and ABID97_RS13380 are separated by 97 nucleotidesABID97_RS13380 and ABID97_RS13385 are separated by 19 nucleotides ABID97_RS13365: ABID97_RS13365 - LysR family transcriptional regulator, at 2,783,166 to 2,784,107 _RS13365 ABID97_RS13370: ABID97_RS13370 - PLP-dependent transferase, at 2,784,243 to 2,785,421 _RS13370 ABID97_RS13375: ABID97_RS13375 - LysR family transcriptional regulator, at 2,785,480 to 2,786,394 _RS13375 ABID97_RS13380: ABID97_RS13380 - NAD(P)-binding domain-containing protein, at 2,786,492 to 2,787,508 _RS13380 ABID97_RS13385: ABID97_RS13385 - dihydrodipicolinate synthase family protein, at 2,787,528 to 2,788,547 _RS13385
Group Condition ABID97_RS13365 ABID97_RS13370 ABID97_RS13375 ABID97_RS13380 ABID97_RS13385
carbon source D,L-Malic Acid (C) -0.4 -0.4 N.D. N.D. -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.0 N.D. N.D. -0.1
control NP -0.4 -0.5 N.D. N.D. -0.5
phage V1_1 -0.3 -0.7 N.D. N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.0 N.D. N.D. +0.4
phage V1_1 -0.5 -0.4 N.D. N.D. +0.1
carbon source L-Alanine (C) +0.3 -1.1 N.D. N.D. -0.0
carbon source Adenine (C) +0.4 -0.5 N.D. N.D. -0.5
carbon source Glycolic Acid (C) +0.3 -0.9 N.D. N.D. +0.2
phage V2_10 -0.6 -0.2 N.D. N.D. +0.4
phage V2_1 +0.4 -0.7 N.D. N.D. -0.1
carbon source L-Asparagine (C) +0.4 -0.7 N.D. N.D. -0.0
carbon source butyrate (C) +0.7 -0.4 N.D. N.D. -0.2
carbon source casaminos (C) +0.5 -0.6 N.D. N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 -0.9 N.D. N.D. +0.0
plant outgrowth control Plant outgrowth control -0.4 +0.4 N.D. N.D. +0.3
carbon source D-Serine (C) +0.8 -0.1 N.D. N.D. -0.3
carbon source L-Arabinose (C) +0.1 +0.7 N.D. N.D. -0.3
carbon source Tween 20 (C) +0.6 +0.2 N.D. N.D. -0.3
carbon source L-Histidine (C) -1.1 +1.0 N.D. N.D. +0.6
carbon source succinate (C) +0.7 +0.3 N.D. N.D. -0.3
carbon source Tween 20 (C) +0.5 +0.5 N.D. N.D. -0.1
carbon source Glucuronamide (C) +0.2 +0.7 N.D. N.D. -0.1
carbon source propionate (C) +1.3 -0.2 N.D. N.D. -0.1
carbon source propionate (C) +0.1 +1.0 N.D. N.D. -0.1
carbon source L-Alanine (C) +0.2 +1.1 N.D. N.D. -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.4 +0.5 N.D. N.D. +0.2
phage V2_100 +0.6 +0.0 N.D. N.D. +0.6
carbon source Formate (C) +0.6 +0.5 N.D. N.D. +0.2
carbon source L-tyrosine (C) +0.2 +1.1 N.D. N.D. +0.3
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