Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13275 and ABID97_RS13280 are separated by 13 nucleotidesABID97_RS13280 and ABID97_RS13285 are separated by 125 nucleotidesABID97_RS13285 and ABID97_RS13290 are separated by 135 nucleotidesABID97_RS13290 and ABID97_RS13295 are separated by 33 nucleotides ABID97_RS13275: ABID97_RS13275 - MDR family oxidoreductase, at 2,765,068 to 2,766,054 _RS13275 ABID97_RS13280: ABID97_RS13280 - thiamine pyrophosphate-dependent enzyme, at 2,766,068 to 2,767,708 _RS13280 ABID97_RS13285: ABID97_RS13285 - aldolase, at 2,767,834 to 2,768,631 _RS13285 ABID97_RS13290: ABID97_RS13290 - amino acid ABC transporter substrate-binding protein, at 2,768,767 to 2,769,786 _RS13290 ABID97_RS13295: ABID97_RS13295 - amino acid ABC transporter permease, at 2,769,820 to 2,770,992 _RS13295
Group Condition ABID97_RS13275 ABID97_RS13280 ABID97_RS13285 ABID97_RS13290 ABID97_RS13295
carbon source butyrate (C) -0.4 +0.3 -0.3 -0.4 -0.9
carbon source propionate (C) +0.5 -0.9 -0.2 -0.0 -0.9
carbon source D,L-Malic Acid (C) -0.5 +0.0 -0.5 -0.6 +0.2
carbon source D-Serine (C) -0.4 -0.2 -0.1 -0.0 -0.7
carbon source D-Xylose (C) +0.0 -0.1 -0.5 -0.4 -0.4
carbon source Adenine (C) -0.2 +0.2 -0.3 -0.0 -0.8
carbon source a-Ketoglutaric (C) -0.2 +0.1 -0.5 -0.7 +0.3
carbon source D-Galactose (C) -0.2 +0.3 +0.0 -0.6 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 -0.6 +0.1 -0.9 -0.6
phage V1_10 +0.2 +0.2 -0.2 -0.4 -0.5
carbon source L-Phenylalanine (C) -0.3 +0.3 +0.1 -0.2 -0.7
carbon source L-Alanine (C) -0.5 +0.1 -0.1 -0.4 +0.2
carbon source Glycolic Acid (C) -0.3 -0.2 +0.3 -0.1 -0.3
carbon source D-Fructose (C) -0.4 +0.3 -0.0 -0.2 -0.2
carbon source succinate (C) +0.1 -0.1 -0.1 -0.7 +0.2
carbon source D,L-Malic Acid (C) +0.7 +0.0 +0.1 -0.3 -1.0
carbon source D-Sorbitol (C) +0.1 +0.3 +0.1 -0.3 -0.7
carbon source L-tyrosine (C) -0.6 +0.2 -0.6 +0.1 +0.6
carbon source L-Proline (C) -0.0 +0.1 -0.4 +0.4 -0.4
carbon source L-Glutamic (C) -0.1 +0.3 +0.3 -0.4 -0.3
carbon source Glucuronamide (C) +0.2 -0.3 -0.2 +0.4 -0.4
carbon source a-Ketoglutaric (C) -0.1 +0.3 +0.1 +0.2 -0.6
carbon source butyrate (C) +0.1 +0.1 -0.3 +0.6 -0.4
plant outgrowth control Plant outgrowth control +0.1 +0.1 +0.7 -0.3 -0.3
phage V2_1 +0.0 +0.2 +0.4 -0.6 +0.3
carbon source L-Fucose (C) +0.1 +0.3 +0.5 -0.0 -0.6
phage V2_100 -0.4 -0.3 +0.8 +0.2 +0.2
carbon source L-Histidine (C) +0.0 +0.6 -0.2 +0.4 -0.1
carbon source L-Malic (C) +0.2 +0.2 -0.2 +0.4 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.4 +0.4 +0.5 +0.3
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ABID97_RS13275
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