Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13265 and ABID97_RS13270 are separated by 162 nucleotidesABID97_RS13270 and ABID97_RS13275 are separated by 23 nucleotidesABID97_RS13275 and ABID97_RS13280 are separated by 13 nucleotidesABID97_RS13280 and ABID97_RS13285 are separated by 125 nucleotides ABID97_RS13265: ABID97_RS13265 - tripartite tricarboxylate transporter substrate binding protein, at 2,763,233 to 2,764,216 _RS13265 ABID97_RS13270: ABID97_RS13270 - TetR/AcrR family transcriptional regulator, at 2,764,379 to 2,765,044 _RS13270 ABID97_RS13275: ABID97_RS13275 - MDR family oxidoreductase, at 2,765,068 to 2,766,054 _RS13275 ABID97_RS13280: ABID97_RS13280 - thiamine pyrophosphate-dependent enzyme, at 2,766,068 to 2,767,708 _RS13280 ABID97_RS13285: ABID97_RS13285 - aldolase, at 2,767,834 to 2,768,631 _RS13285
Group Condition ABID97_RS13265 ABID97_RS13270 ABID97_RS13275 ABID97_RS13280 ABID97_RS13285
carbon source L-Threonine (C) -0.3 -0.9 +0.0 -0.2 -0.3
carbon source D-Xylose (C) -0.5 -0.4 +0.0 -0.1 -0.5
carbon source D-Fructose (C) -0.2 -0.3 -0.1 +0.1 -0.6
carbon source propionate (C) -0.3 -0.2 +0.5 -0.9 -0.2
carbon source a-Ketoglutaric (C) -0.2 -0.2 -0.2 +0.1 -0.5
carbon source L-Leucine (C) -0.1 -0.6 +0.1 -0.0 -0.3
carbon source D-Arabinose (C) +0.4 -0.6 -0.3 -0.0 -0.1
carbon source casaminos (C) +0.4 -0.7 -0.1 -0.4 +0.2
carbon source D-Gluconic Acid (C) +0.3 -0.2 -0.2 +0.1 -0.6
carbon source Glycolic Acid (C) -0.0 -0.4 -0.3 -0.2 +0.3
carbon source D-Arabinose (C) -0.3 -0.6 +0.2 -0.0 +0.1
carbon source L-Phenylalanine (C) +0.2 -0.8 -0.3 +0.3 +0.1
carbon source D-Glucose (C) +0.6 -1.2 -0.1 +0.3 -0.0
carbon source butyrate (C) +0.1 -0.2 -0.4 +0.3 -0.3
carbon source Glycolic Acid (C) +0.5 -0.3 -0.2 -0.2 -0.2
carbon source D,L-Malic Acid (C) +0.6 -0.0 -0.5 +0.0 -0.5
carbon source D,L-Malic Acid (C) -0.5 -0.4 +0.7 +0.0 +0.1
carbon source L-Histidine (C) -0.3 -0.1 +0.0 +0.6 -0.2
phage V2_100 -0.0 +0.0 -0.4 -0.3 +0.8
carbon source L-tyrosine (C) +1.0 +0.1 -0.6 +0.2 -0.6
carbon source L-Asparagine (C) +0.7 -0.1 +0.1 -0.3 +0.0
phage V2_1 -0.4 +0.3 +0.0 +0.2 +0.4
carbon source Fumarate (C) +0.7 -0.2 +0.1 +0.0 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 +1.0 -0.6 +0.1
carbon source L-Glutamine (C) +0.4 -0.5 +0.4 +0.3 -0.0
phage V1_10 +0.4 -0.2 -0.1 +0.3 +0.2
carbon source Gly-Glu (C) +0.7 -0.3 +0.0 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.3 +0.6 -0.4 +0.4
carbon source succinate (C) +0.6 -0.2 +0.2 +0.2 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.6 +0.2 +0.4 +0.2 +0.2
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