Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13185 and ABID97_RS13190 are separated by 36 nucleotidesABID97_RS13190 and ABID97_RS13195 are separated by 135 nucleotidesABID97_RS13195 and ABID97_RS13200 are separated by 19 nucleotidesABID97_RS13200 and ABID97_RS13205 are separated by 12 nucleotides ABID97_RS13185: ABID97_RS13185 - branched-chain amino acid ABC transporter permease, at 2,746,407 to 2,747,264 _RS13185 ABID97_RS13190: ABID97_RS13190 - ABC transporter substrate-binding protein, at 2,747,301 to 2,748,479 _RS13190 ABID97_RS13195: ABID97_RS13195 - maleylacetate reductase, at 2,748,615 to 2,749,691 _RS13195 ABID97_RS13200: ABID97_RS13200 - intradiol ring-cleavage dioxygenase, at 2,749,711 to 2,750,559 _RS13200 ABID97_RS13205: ABID97_RS13205 - tripartite tricarboxylate transporter substrate binding protein, at 2,750,572 to 2,751,534 _RS13205
Group Condition ABID97_RS13185 ABID97_RS13190 ABID97_RS13195 ABID97_RS13200 ABID97_RS13205
r2a outgrowth control R2A outgrowth control -0.5 -0.5 -1.0 N.D. +0.3
carbon source L-Fucose (C) +0.3 -0.3 -1.5 N.D. +0.2
carbon source D-Serine (C) -0.1 -0.4 -0.9 N.D. +0.3
carbon source pyruvate (C) -0.6 +0.2 -0.9 N.D. +0.2
carbon source L-Histidine (C) -0.5 -0.3 -0.7 N.D. +0.7
carbon source L-Alanine (C) -0.2 +0.6 -1.5 N.D. +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 +0.3 -0.9 N.D. +0.6
carbon source Adenine (C) +0.4 -0.2 -1.0 N.D. +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.5 -0.6 N.D. +0.3
carbon source butyrate (C) +0.5 +0.3 -0.4 N.D. -0.7
carbon source D-Serine (C) +0.2 +0.2 -0.9 N.D. +0.5
carbon source L-Leucine (C) +0.4 -0.1 -1.0 N.D. +0.5
carbon source L-Threonine (C) +0.5 +0.2 -0.9 N.D. +0.2
carbon source Glycolic Acid (C) +0.4 +0.2 -1.1 N.D. +0.4
carbon source L-Alanine (C) -0.2 +0.6 -0.7 N.D. +0.2
carbon source Glucuronamide (C) +0.2 -1.0 -0.1 N.D. +1.0
carbon source L-Leucine (C) +0.4 +0.6 -1.2 N.D. +0.6
carbon source 4-Hydroxybenzoic Acid (C) -1.1 +0.5 +0.0 N.D. +1.1
carbon source Tween 20 (C) +0.3 +0.4 -0.7 N.D. +0.5
carbon source Glycerol (C) +0.2 +0.2 -0.6 N.D. +0.7
carbon source L-Arabinose (C) +0.4 +0.6 -0.6 N.D. +0.1
carbon source L-Proline (C) +0.5 +0.6 -0.6 N.D. +0.2
carbon source D,L-Lactate (C) +0.3 +0.3 -0.5 N.D. +0.7
carbon source L-Glutamine (C) +0.5 +0.5 -0.6 N.D. +0.5
carbon source L-Lactate (C) -0.1 +0.7 -0.5 N.D. +0.6
carbon source L-Glutamine (C) +0.5 +0.1 -0.5 N.D. +0.7
carbon source succinate (C) +0.4 +0.6 -0.8 N.D. +0.7
carbon source propionate (C) +0.5 +0.8 -0.3 N.D. +0.2
carbon source Gly-Glu (C) +0.5 +0.5 -0.3 N.D. +0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.4 +0.5 +0.2 N.D. +0.6
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