Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS13150 and ABID97_RS13155 are separated by 28 nucleotidesABID97_RS13155 and ABID97_RS13160 are separated by 87 nucleotidesABID97_RS13160 and ABID97_RS13165 are separated by 33 nucleotidesABID97_RS13165 and ABID97_RS13170 are separated by 43 nucleotides ABID97_RS13150: ABID97_RS13150 - LysR family transcriptional regulator, at 2,740,208 to 2,741,107 _RS13150 ABID97_RS13155: ABID97_RS13155 - MarR family winged helix-turn-helix transcriptional regulator, at 2,741,136 to 2,741,741 _RS13155 ABID97_RS13160: ABID97_RS13160 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 2,741,829 to 2,742,926 _RS13160 ABID97_RS13165: ABID97_RS13165 - PDR/VanB family oxidoreductase, at 2,742,960 to 2,743,916 _RS13165 ABID97_RS13170: ABID97_RS13170 - ABC transporter ATP-binding protein, at 2,743,960 to 2,744,673 _RS13170
Group Condition ABID97_RS13150 ABID97_RS13155 ABID97_RS13160 ABID97_RS13165 ABID97_RS13170
carbon source L-Alanine (C) N.D. -3.2 -0.0 +0.5 -0.7
carbon source D-Serine (C) N.D. -1.4 -0.3 +0.3 -1.0
carbon source Glycerol (C) N.D. -0.8 -0.5 -0.2 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.8 -0.1 -0.1 -0.1
carbon source L-Threonine (C) N.D. -1.5 -0.2 -0.0 -0.3
carbon source L-Phenylalanine (C) N.D. -1.7 -0.2 +0.3 -0.5
carbon source D-Gluconic Acid (C) N.D. -1.4 -0.3 -0.2 -0.1
carbon source D-Gluconic Acid (C) N.D. -1.0 -0.4 -0.1 -0.3
carbon source Gly-Glu (C) N.D. -1.1 -0.8 -0.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.8 -0.4 +0.1 -0.7
carbon source L-Lactate (C) N.D. -0.7 -0.2 +0.3 -1.0
carbon source L-Tryptophan (C) N.D. -0.5 -0.3 +0.1 -0.8
carbon source a-Ketoglutaric (C) N.D. -1.3 -0.1 +0.1 -0.1
carbon source L-Histidine (C) N.D. -1.3 -0.4 +0.7 -0.4
carbon source D,L-Lactate (C) N.D. -0.4 -0.0 +0.3 -1.2
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.2 -0.5 +0.2 +0.1
carbon source L-Phenylalanine (C) N.D. -1.4 -0.0 +0.2 -0.0
carbon source D-Glucose (C) N.D. -1.5 -0.1 +0.2 +0.2
carbon source L-Histidine (C) N.D. -1.2 -0.0 -0.3 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -2.1 +0.2 +0.5 +0.4
carbon source D,L-Lactate (C) N.D. -0.1 -0.2 +0.4 -1.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. -1.6 +0.3 +0.5 -0.1
carbon source L-Alanine (C) N.D. -1.0 -0.5 +0.5 +0.1
carbon source D,L-Malic Acid (C) N.D. +0.2 -0.3 +0.6 -1.2
carbon source pyruvate (C) N.D. +0.3 -0.3 +0.3 -0.8
carbon source D-Fructose (C) N.D. -0.8 +0.0 +0.7 -0.3
carbon source L-tyrosine (C) N.D. -1.0 +0.4 +0.4 +0.3
phage V2_100 N.D. +0.5 -0.2 +0.1 +1.1
carbon source butyrate (C) N.D. +1.2 -0.2 +0.5 +0.2
carbon source butyrate (C) N.D. +1.3 +0.1 -0.3 +0.6
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ABID97_RS13150
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