Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12965 and ABID97_RS12970 overlap by 23 nucleotidesABID97_RS12970 and ABID97_RS12975 overlap by 4 nucleotidesABID97_RS12975 and ABID97_RS12980 are separated by 10 nucleotidesABID97_RS12980 and ABID97_RS12985 are separated by 14 nucleotides ABID97_RS12965: ABID97_RS12965 - DUF2169 domain-containing protein, at 2,693,084 to 2,694,040 _RS12965 ABID97_RS12970: ABID97_RS12970 - pentapeptide repeat-containing protein, at 2,694,018 to 2,696,165 _RS12970 ABID97_RS12975: ABID97_RS12975 - pentapeptide repeat-containing protein, at 2,696,162 to 2,697,259 _RS12975 ABID97_RS12980: ABID97_RS12980 - DUF3540 domain-containing protein, at 2,697,270 to 2,697,983 _RS12980 ABID97_RS12985: ABID97_RS12985 - DUF4150 domain-containing protein, at 2,697,998 to 2,698,390 _RS12985
Group Condition ABID97_RS12965 ABID97_RS12970 ABID97_RS12975 ABID97_RS12980 ABID97_RS12985
phage V2_100 -0.6 -1.6 N.D. N.D. N.D.
carbon source Fumarate (C) -0.6 -1.6 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -1.0 -0.7 N.D. N.D. N.D.
carbon source Formate (C) -1.2 -0.3 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -0.3 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control -0.4 -0.6 N.D. N.D. N.D.
phage V1_1 -0.6 -0.3 N.D. N.D. N.D.
carbon source Tween 20 (C) -1.3 +0.4 N.D. N.D. N.D.
carbon source D-Glucuronic Acid (C) -1.1 +0.4 N.D. N.D. N.D.
plant outgrowth control Plant outgrowth control +0.3 -0.9 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control -0.8 +0.3 N.D. N.D. N.D.
carbon source D-Ribose (C) -0.6 +0.3 N.D. N.D. N.D.
carbon source L-Fucose (C) -0.7 +0.4 N.D. N.D. N.D.
carbon source D-Xylose (C) -0.6 +0.3 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) +0.8 -0.7 N.D. N.D. N.D.
carbon source propionate (C) -0.6 +0.7 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) +0.7 -0.6 N.D. N.D. N.D.
carbon source acetate (C) +0.7 -0.2 N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) +0.9 -0.1 N.D. N.D. N.D.
carbon source L-tyrosine (C) +1.4 -0.5 N.D. N.D. N.D.
carbon source L-Alanine (C) +0.1 +0.8 N.D. N.D. N.D.
carbon source D,L-Lactate (C) +0.1 +0.9 N.D. N.D. N.D.
carbon source L-Glutamine (C) +0.5 +0.6 N.D. N.D. N.D.
carbon source L-tyrosine (C) +0.8 +0.3 N.D. N.D. N.D.
carbon source L-Arabinose (C) +0.6 +0.6 N.D. N.D. N.D.
carbon source Glycerol (C) +0.6 +0.6 N.D. N.D. N.D.
carbon source D-Arabinose (C) +0.6 +0.7 N.D. N.D. N.D.
carbon source L-Tryptophan (C) +0.9 +0.5 N.D. N.D. N.D.
carbon source L-Glutamic (C) +0.8 +0.6 N.D. N.D. N.D.
carbon source D-Serine (C) +0.5 +1.1 N.D. N.D. N.D.
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ABID97_RS12965
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ABID97_RS12970
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ABID97_RS12985
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