Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12935 and ABID97_RS12940 are separated by 37 nucleotidesABID97_RS12940 and ABID97_RS12945 overlap by 13 nucleotidesABID97_RS12945 and ABID97_RS12950 overlap by 14 nucleotidesABID97_RS12950 and ABID97_RS12955 are separated by 17 nucleotides ABID97_RS12935: ABID97_RS12935 - type VI secretion system baseplate subunit TssE, at 2,680,865 to 2,681,281 _RS12935 ABID97_RS12940: ABID97_RS12940 - type VI secretion system baseplate subunit TssF, at 2,681,319 to 2,683,082 _RS12940 ABID97_RS12945: ABID97_RS12945 - type VI secretion system baseplate subunit TssG, at 2,683,070 to 2,684,095 _RS12945 ABID97_RS12950: ABID97_RS12950 - type VI secretion system ATPase TssH, at 2,684,082 to 2,686,742 _RS12950 ABID97_RS12955: ABID97_RS12955 - type VI secretion system tip protein TssI/VgrG, at 2,686,760 to 2,689,810 _RS12955
Group Condition ABID97_RS12935 ABID97_RS12940 ABID97_RS12945 ABID97_RS12950 ABID97_RS12955
phage V2_100 N.D. -0.5 -0.2 -0.5 +0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.0 -0.3 -0.2 -0.3
carbon source Glucuronamide (C) N.D. -0.2 -0.1 -0.4 -0.1
r2a outgrowth control R2A outgrowth control N.D. +0.0 -0.0 -0.1 -0.7
carbon source D-Glucose (C) N.D. -0.2 -0.0 -0.4 -0.2
phage V2_10 N.D. -0.2 -0.1 -0.4 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 -0.1 +0.2 -0.3
carbon source D-Mannose (C) N.D. -0.3 -0.2 -0.3 +0.2
phage V1_10 N.D. +0.0 -0.1 -0.6 +0.1
phage V2_1 N.D. -0.1 -0.2 -0.4 +0.2
phage V1_1 N.D. -0.1 -0.2 -0.3 +0.2
carbon source Glucuronamide (C) N.D. -0.3 -0.3 -0.2 +0.3
carbon source D,L-Malic Acid (C) N.D. +0.0 -0.3 -0.3 +0.1
carbon source Tween 20 (C) N.D. +0.3 -0.4 -0.2 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.2 +0.2 -0.6 -0.1
carbon source L-Proline (C) N.D. +0.0 -0.4 +0.2 -0.1
carbon source D-Fructose (C) N.D. +0.1 -0.3 -0.2 +0.2
carbon source casaminos (C) N.D. -0.2 -0.4 +0.1 +0.1
carbon source L-Fucose (C) N.D. -0.4 +0.2 +0.1 -0.2
carbon source L-Lactate (C) N.D. -0.1 -0.3 +0.2 -0.1
carbon source butyrate (C) N.D. -0.1 -0.2 -0.0 +0.4
carbon source propionate (C) N.D. +0.5 -0.3 -0.1 -0.0
carbon source D-Mannose (C) N.D. -0.3 -0.3 +0.4 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 -0.2 +0.5 +0.0
carbon source D-Glucose (C) N.D. -0.2 +0.1 +0.3 +0.1
carbon source D-Galactose (C) N.D. +0.1 -0.2 +0.1 +0.3
carbon source propionate (C) N.D. -0.1 +0.7 -0.2 -0.0
carbon source L-Histidine (C) N.D. +0.1 +0.2 -0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.2 +0.1 +0.2 +0.3
carbon source L-Histidine (C) N.D. +0.2 +0.1 +0.4 +0.0
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ABID97_RS12935
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ABID97_RS12940
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ABID97_RS12955
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