Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12870 and ABID97_RS12875 are separated by 19 nucleotidesABID97_RS12875 and ABID97_RS12880 are separated by 77 nucleotidesABID97_RS12880 and ABID97_RS12885 are separated by 51 nucleotidesABID97_RS12885 and ABID97_RS12890 overlap by 4 nucleotides ABID97_RS12870: ABID97_RS12870 - HAD-IA family hydrolase, at 2,666,603 to 2,667,331 _RS12870 ABID97_RS12875: ABID97_RS12875 - class 1 fructose-bisphosphatase, at 2,667,351 to 2,668,424 _RS12875 ABID97_RS12880: ABID97_RS12880 - phosphoribulokinase, at 2,668,502 to 2,669,380 _RS12880 ABID97_RS12885: ABID97_RS12885 - transketolase, at 2,669,432 to 2,671,471 _RS12885 ABID97_RS12890: ABID97_RS12890 - phosphoglycerate kinase, at 2,671,468 to 2,672,649 _RS12890
Group Condition ABID97_RS12870 ABID97_RS12875 ABID97_RS12880 ABID97_RS12885 ABID97_RS12890
carbon source Formate (C) N.D. -1.8 -1.5 -0.6 N.D.
carbon source D,L-Malic Acid (C) N.D. -0.6 -0.6 -0.9 N.D.
carbon source L-Proline (C) N.D. -0.9 -1.0 +0.3 N.D.
carbon source Formate (C) N.D. -0.6 -0.7 -0.2 N.D.
carbon source Adenine (C) N.D. -0.9 -0.2 -0.3 N.D.
carbon source L-Fucose (C) N.D. -0.4 -0.6 -0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.0 -0.0 -1.3 N.D.
carbon source L-Proline (C) N.D. -0.6 -0.7 +0.3 N.D.
carbon source D-Glucose (C) N.D. +0.1 -0.6 -0.4 N.D.
carbon source D-Galactose (C) N.D. -0.3 -0.5 +0.3 N.D.
carbon source Ethanol (C) N.D. -0.6 -0.2 +0.6 N.D.
carbon source L-Histidine (C) N.D. +0.5 -0.4 +0.3 N.D.
carbon source D-Glucose (C) N.D. +0.8 -0.1 -0.4 N.D.
carbon source butyrate (C) N.D. +0.9 -0.1 -0.4 N.D.
carbon source L-Glutamine (C) N.D. +0.6 -0.3 +0.2 N.D.
carbon source L-Asparagine (C) N.D. -0.4 +0.0 +1.0 N.D.
carbon source pyruvate (C) N.D. +0.4 -0.3 +0.6 N.D.
carbon source L-Leucine (C) N.D. +0.7 -0.2 +0.4 N.D.
carbon source D-Serine (C) N.D. +0.7 -0.4 +0.7 N.D.
carbon source succinate (C) N.D. +0.2 -0.1 +0.9 N.D.
carbon source Gly-Glu (C) N.D. +0.3 -0.1 +0.8 N.D.
carbon source D-Xylose (C) N.D. +0.6 -0.1 +0.6 N.D.
carbon source L-tyrosine (C) N.D. +0.7 +0.1 +0.4 N.D.
carbon source L-Lactate (C) N.D. +0.3 +0.3 +0.7 N.D.
carbon source D,L-Malic Acid (C) N.D. +0.2 -0.2 +1.3 N.D.
carbon source D-Glucuronic Acid (C) N.D. +0.7 -0.2 +0.7 N.D.
carbon source L-Phenylalanine (C) N.D. +0.5 +0.4 +0.4 N.D.
carbon source L-Alanine (C) N.D. +1.0 +0.3 +0.1 N.D.
carbon source L-Alanine (C) N.D. +1.1 -0.1 +0.4 N.D.
carbon source propionate (C) N.D. +0.7 +0.6 +2.0 N.D.
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ABID97_RS12870
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ABID97_RS12875
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