Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12810 and ABID97_RS12815 are separated by 38 nucleotidesABID97_RS12815 and ABID97_RS12820 overlap by 4 nucleotidesABID97_RS12820 and ABID97_RS12825 are separated by 74 nucleotidesABID97_RS12825 and ABID97_RS12830 overlap by 4 nucleotides ABID97_RS12810: ABID97_RS12810 - ABC transporter ATP-binding protein, at 2,654,001 to 2,654,714 _RS12810 ABID97_RS12815: ABID97_RS12815 - PQQ-dependent catabolism-associated beta-propeller protein, at 2,654,753 to 2,655,763 _RS12815 ABID97_RS12820: ABID97_RS12820 - branched-chain amino acid ABC transporter substrate-binding protein, at 2,655,760 to 2,656,938 _RS12820 ABID97_RS12825: ABID97_RS12825 - ABC transporter permease, at 2,657,013 to 2,657,810 _RS12825 ABID97_RS12830: ABID97_RS12830 - tripartite tricarboxylate transporter substrate binding protein, at 2,657,807 to 2,658,802 _RS12830
Group Condition ABID97_RS12810 ABID97_RS12815 ABID97_RS12820 ABID97_RS12825 ABID97_RS12830
carbon source L-tyrosine (C) N.D. +0.3 -4.9 -0.0 +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.5 -0.3 -0.2 -0.5
phage V1_10 N.D. -0.1 -0.8 -0.2 -0.2
carbon source D,L-Malic Acid (C) N.D. +0.4 -1.0 +0.1 -0.6
carbon source D-Mannose (C) N.D. +0.0 -1.1 -0.1 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.7 -0.5 -0.3 +0.5
carbon source Ethanol (C) N.D. -0.5 +0.3 -0.6 -0.1
phage V1_1 N.D. -0.3 -0.5 -0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.3 -0.6 -0.3 +0.5
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.0 -0.8 +0.5 -0.3
carbon source D-Arabinose (C) N.D. +0.3 -1.0 -0.1 +0.2
phage V2_10 N.D. -0.4 +0.6 -0.3 -0.0
phage V2_10 N.D. +0.0 -0.6 -0.1 +0.6
carbon source L-Leucine (C) N.D. -0.0 -0.8 +0.2 +0.5
carbon source D-Arabinose (C) N.D. -0.6 +0.1 +0.2 +0.2
carbon source Ethanol (C) N.D. -0.4 +0.8 -0.2 -0.2
control NP N.D. -0.1 +0.7 -0.1 -0.4
carbon source D-Glucose (C) N.D. -0.4 +0.6 +0.2 -0.0
carbon source Fumarate (C) N.D. -0.4 +0.6 +0.2 -0.0
carbon source L-Proline (C) N.D. +0.2 -0.4 +0.3 +0.4
carbon source L-Histidine (C) N.D. +0.6 -0.6 +0.2 +0.3
carbon source D-Gluconic Acid (C) N.D. -0.3 +0.5 +0.2 +0.2
carbon source L-Asparagine (C) N.D. +0.5 +0.5 +0.0 -0.3
carbon source butyrate (C) N.D. -0.2 +0.1 +0.3 +0.7
carbon source Formate (C) N.D. -0.1 +0.7 -0.0 +0.7
phage V2_100 N.D. +0.1 +0.4 +0.1 +0.8
carbon source L-Histidine (C) N.D. +0.2 +0.8 +0.1 +0.4
carbon source Glucuronamide (C) N.D. -0.0 +1.0 +0.1 +0.4
carbon source Formate (C) N.D. +0.3 +0.2 +0.2 +0.9
carbon source L-Phenylalanine (C) N.D. +0.2 +0.7 +0.4 +0.3
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