Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS12725 and ABID97_RS12730 overlap by 4 nucleotidesABID97_RS12730 and ABID97_RS12735 overlap by 4 nucleotidesABID97_RS12735 and ABID97_RS12740 overlap by 17 nucleotidesABID97_RS12740 and ABID97_RS12745 overlap by 4 nucleotides ABID97_RS12725: ABID97_RS12725 - pyrroloquinoline-quinone synthase PqqC, at 2,639,964 to 2,640,737 _RS12725 ABID97_RS12730: ABID97_RS12730 - pyrroloquinoline quinone biosynthesis peptide chaperone PqqD, at 2,640,734 to 2,641,027 _RS12730 ABID97_RS12735: ABID97_RS12735 - pyrroloquinoline quinone biosynthesis protein PqqE, at 2,641,024 to 2,642,175 _RS12735 ABID97_RS12740: ABID97_RS12740 - MxaL protein, at 2,642,159 to 2,643,154 _RS12740 ABID97_RS12745: ABID97_RS12745 - MxaK protein, at 2,643,151 to 2,643,702 _RS12745
Group Condition ABID97_RS12725 ABID97_RS12730 ABID97_RS12735 ABID97_RS12740 ABID97_RS12745
phage V2_100 -0.8 N.D. +0.7 -0.7 -1.7
carbon source L-Alanine (C) -0.8 N.D. -0.0 -0.6 -0.3
carbon source L-Fucose (C) -0.3 N.D. -0.4 -0.2 -0.5
carbon source propionate (C) -1.1 N.D. +0.0 +0.1 -0.1
carbon source D-Ribose (C) -0.9 N.D. -0.5 +0.3 +0.2
carbon source L-Alanine (C) +0.4 N.D. -0.0 -0.8 -0.3
carbon source D-Serine (C) -0.9 N.D. -0.1 +0.0 +0.4
carbon source D-Xylose (C) -0.2 N.D. -0.6 +0.5 -0.2
carbon source D-Glucose (C) -0.6 N.D. -0.3 -0.1 +0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. +0.3 -0.7 -0.2
carbon source Ethanol (C) -0.8 N.D. -0.0 -0.2 +0.7
carbon source Ethanol (C) -0.8 N.D. -0.3 +0.1 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 N.D. -0.5 -0.3 -0.0
carbon source L-Glutamine (C) -0.1 N.D. -0.5 -0.1 +0.6
carbon source D,L-Malic Acid (C) -0.5 N.D. +0.1 -0.3 +0.7
carbon source 2-Deoxy-D-Ribose (C) -0.5 N.D. -0.2 +0.1 +0.7
carbon source L-Phenylalanine (C) +0.3 N.D. +0.4 -0.1 -0.4
phage V1_10 +0.4 N.D. +0.2 +0.2 -0.5
carbon source L-Leucine (C) +0.4 N.D. -0.4 -0.0 +0.4
carbon source L-Glutamic (C) +0.0 N.D. +0.2 -0.5 +0.7
carbon source D-Glucuronic Acid (C) -0.1 N.D. -0.2 -0.1 +1.0
control NP -0.2 N.D. +0.1 -0.1 +1.0
carbon source D-Xylose (C) -0.1 N.D. -0.0 -0.2 +1.2
carbon source Glucuronamide (C) +0.6 N.D. +0.3 -0.4 +0.4
carbon source Gly-Glu (C) +0.3 N.D. -0.1 +0.2 +0.6
carbon source L-Arabinose (C) +0.5 N.D. +0.2 -0.0 +0.5
carbon source L-Leucine (C) +0.4 N.D. +0.2 -0.0 +0.8
carbon source L-Phenylalanine (C) +0.4 N.D. +0.4 -0.0 +0.6
carbon source Tween 20 (C) +0.3 N.D. -0.1 +0.2 +1.0
carbon source D-Serine (C) +0.4 N.D. -0.2 +0.1 +1.3
remove
ABID97_RS12725
plot
remove
ABID97_RS12730
plot
remove
ABID97_RS12735
remove
ABID97_RS12740
plot
remove
ABID97_RS12745
plot