Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12640 and ABID97_RS12645 are separated by 29 nucleotidesABID97_RS12645 and ABID97_RS12650 are separated by 231 nucleotidesABID97_RS12650 and ABID97_RS12655 overlap by 4 nucleotidesABID97_RS12655 and ABID97_RS12660 overlap by 1 nucleotides ABID97_RS12640: ABID97_RS12640 - ATP-grasp domain-containing protein, at 2,623,658 to 2,624,647 _RS12640 ABID97_RS12645: ABID97_RS12645 - HisA/HisF-related TIM barrel protein, at 2,624,677 to 2,625,393 _RS12645 ABID97_RS12650: ABID97_RS12650 - formylmethanofuran dehydrogenase, at 2,625,625 to 2,626,857 _RS12650 ABID97_RS12655: ABID97_RS12655 - formylmethanofuran dehydrogenase subunit A, at 2,626,854 to 2,628,539 _RS12655 ABID97_RS12660: ABID97_RS12660 - formylmethanofuran--tetrahydromethanopterin N-formyltransferase, at 2,628,539 to 2,629,504 _RS12660
Group Condition ABID97_RS12640 ABID97_RS12645 ABID97_RS12650 ABID97_RS12655 ABID97_RS12660
carbon source D-Glucuronic Acid (C) N.D. -0.1 N.D. +0.1 -2.3
carbon source D,L-Malic Acid (C) N.D. -1.2 N.D. -0.8 -0.0
carbon source L-Alanine (C) N.D. -0.2 N.D. -0.1 -1.7
r2a outgrowth control R2A outgrowth control N.D. +0.3 N.D. -0.1 -1.8
carbon source D-Glucose (C) N.D. +0.4 N.D. -0.1 -1.7
phage V2_10 N.D. +0.1 N.D. -0.2 -1.2
carbon source Tween 20 (C) N.D. -0.3 N.D. -0.2 -0.9
carbon source D-Serine (C) N.D. -0.4 N.D. +0.1 -1.0
carbon source butyrate (C) N.D. +0.1 N.D. -0.0 -1.1
phage V2_100 N.D. +0.6 N.D. -0.1 -1.5
carbon source Glucuronamide (C) N.D. -0.4 N.D. -0.2 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.5 N.D. -0.2 -1.3
carbon source L-Alanine (C) N.D. -0.4 N.D. +0.0 -0.6
carbon source L-tyrosine (C) N.D. +0.3 N.D. +0.0 -1.2
carbon source pyruvate (C) N.D. +0.5 N.D. -0.1 -0.9
carbon source D-Glucose (C) N.D. +0.4 N.D. +0.1 -0.9
carbon source D-Xylose (C) N.D. +0.3 N.D. -0.4 -0.3
carbon source L-Histidine (C) N.D. +0.4 N.D. +0.1 -0.7
carbon source D-Sorbitol (C) N.D. +0.4 N.D. +0.1 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.7 N.D. +0.1 -0.8
carbon source D-Ribose (C) N.D. +0.4 N.D. +0.2 -0.4
carbon source casaminos (C) N.D. -0.1 N.D. -0.1 +0.8
carbon source L-Threonine (C) N.D. +0.3 N.D. -0.2 +0.5
phage V1_10 N.D. +0.4 N.D. -0.1 +0.4
carbon source L-tyrosine (C) N.D. +0.3 N.D. -0.2 +0.6
carbon source L-Arabinose (C) N.D. -0.3 N.D. +0.2 +0.8
carbon source D-Fructose (C) N.D. +0.4 N.D. +0.1 +0.8
carbon source L-Phenylalanine (C) N.D. +1.2 N.D. +0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +1.3 N.D. +0.1 +0.8
carbon source L-Phenylalanine (C) N.D. +1.5 N.D. +0.3 +0.6
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