Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12465 and ABID97_RS12470 are separated by 82 nucleotidesABID97_RS12470 and ABID97_RS12475 are separated by 18 nucleotidesABID97_RS12475 and ABID97_RS12480 are separated by 409 nucleotidesABID97_RS12480 and ABID97_RS12485 are separated by 100 nucleotides ABID97_RS12465: ABID97_RS12465 - dicarboxylate/amino acid:cation symporter, at 2,582,065 to 2,583,408 _RS12465 ABID97_RS12470: ABID97_RS12470 - YbaL family putative K(+) efflux transporter, at 2,583,491 to 2,585,194 _RS12470 ABID97_RS12475: ABID97_RS12475 - hypothetical protein, at 2,585,213 to 2,585,617 _RS12475 ABID97_RS12480: ABID97_RS12480 - homoserine dehydrogenase, at 2,586,027 to 2,587,388 _RS12480 ABID97_RS12485: ABID97_RS12485 - DUF1090 family protein, at 2,587,489 to 2,587,824 _RS12485
Group Condition ABID97_RS12465 ABID97_RS12470 ABID97_RS12475 ABID97_RS12480 ABID97_RS12485
carbon source L-Threonine (C) +0.0 +0.7 +0.9 -5.4 N.D.
carbon source L-Threonine (C) +0.5 +0.8 +0.5 -4.7 N.D.
carbon source a-Ketoglutaric (C) -2.2 +0.6 -0.3 -0.2 N.D.
carbon source Fumarate (C) -0.9 -0.1 -0.0 -0.2 N.D.
carbon source D-Glucose (C) -0.4 -0.5 -0.4 +0.1 N.D.
carbon source L-Proline (C) -0.2 -0.4 -0.2 -0.2 N.D.
carbon source D-Xylose (C) -0.1 -0.3 -0.3 -0.4 N.D.
carbon source a-Ketoglutaric (C) -2.0 +0.5 +0.1 +0.3 N.D.
carbon source Glucuronamide (C) -0.3 -0.3 +0.0 -0.3 N.D.
carbon source L-Malic (C) -0.6 -0.1 -0.1 -0.1 N.D.
carbon source L-Tryptophan (C) -0.1 -0.1 -0.5 -0.2 N.D.
carbon source L-Malic (C) -0.6 +0.0 -0.4 +0.1 N.D.
carbon source L-Alanine (C) +0.2 -0.2 -0.5 -0.3 N.D.
carbon source D-Serine (C) +0.1 -0.4 -0.4 -0.1 N.D.
carbon source pyruvate (C) -0.2 +0.1 -0.7 +0.0 N.D.
carbon source L-tyrosine (C) -0.0 +0.1 -0.4 -0.4 N.D.
carbon source succinate (C) -0.7 +0.1 +0.0 -0.2 N.D.
phage V2_100 +0.6 -0.6 -0.2 -0.4 N.D.
phage V1_10 +0.0 -0.5 -0.3 +0.1 N.D.
carbon source D,L-Malic Acid (C) +0.1 +0.1 -0.7 -0.0 N.D.
carbon source Tween 20 (C) +0.1 +0.1 -0.6 -0.2 N.D.
carbon source propionate (C) -0.3 +0.4 -0.4 -0.1 N.D.
carbon source Fumarate (C) -0.4 +0.1 +0.3 -0.3 N.D.
carbon source L-Lactate (C) +0.3 +0.1 -0.4 -0.2 N.D.
carbon source propionate (C) +0.1 +0.4 -0.6 -0.0 N.D.
carbon source butyrate (C) -0.2 +0.3 +0.2 -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.3 +0.2 +0.1 N.D.
carbon source acetate (C) +0.3 +0.1 -0.2 +0.2 N.D.
phage V1_10 +0.0 +0.3 -0.1 +0.4 N.D.
r2a outgrowth control R2A outgrowth control +0.5 +0.5 +0.0 -0.2 N.D.
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