Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS12420 and ABID97_RS12425 are separated by 198 nucleotidesABID97_RS12425 and ABID97_RS12430 are separated by 106 nucleotidesABID97_RS12430 and ABID97_RS12435 are separated by 0 nucleotidesABID97_RS12435 and ABID97_RS12440 are separated by 20 nucleotides ABID97_RS12420: ABID97_RS12420 - acetyl-CoA C-acetyltransferase, at 2,573,050 to 2,574,228 _RS12420 ABID97_RS12425: ABID97_RS12425 - LysR substrate-binding domain-containing protein, at 2,574,427 to 2,575,338 _RS12425 ABID97_RS12430: ABID97_RS12430 - tripartite tricarboxylate transporter substrate binding protein, at 2,575,445 to 2,576,437 _RS12430 ABID97_RS12435: ABID97_RS12435 - MaoC family dehydratase N-terminal domain-containing protein, at 2,576,438 to 2,577,343 _RS12435 ABID97_RS12440: ABID97_RS12440 - CaiB/BaiF CoA-transferase family protein, at 2,577,364 to 2,578,545 _RS12440
Group Condition ABID97_RS12420 ABID97_RS12425 ABID97_RS12430 ABID97_RS12435 ABID97_RS12440
carbon source Gly-Glu (C) N.D. N.D. -0.3 -0.0 -1.5
carbon source L-Histidine (C) N.D. N.D. -0.2 -0.0 -1.7
carbon source Gly-Glu (C) N.D. N.D. -0.2 +0.1 -1.7
carbon source L-Histidine (C) N.D. N.D. +0.1 +0.0 -1.9
carbon source D-Gluconic Acid (C) N.D. N.D. +0.0 -0.1 -1.7
carbon source D-Mannose (C) N.D. N.D. -0.3 -0.3 -1.0
carbon source L-Alanine (C) N.D. N.D. -0.0 -0.3 -1.3
carbon source D-Gluconic Acid (C) N.D. N.D. +0.1 +0.2 -2.0
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.1 -0.2 -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.1 -0.5 -1.0
carbon source D-Glucose (C) N.D. N.D. -0.2 -0.2 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.3 -0.3 -0.9
phage V1_1 N.D. N.D. -0.3 -0.7 -0.2
carbon source D-Glucose (C) N.D. N.D. -0.1 -0.1 -1.0
carbon source L-Fucose (C) N.D. N.D. -0.1 -0.5 -0.6
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.1 +0.1 -1.0
carbon source L-Proline (C) N.D. N.D. -0.2 +0.1 -0.9
carbon source Glucuronamide (C) N.D. N.D. -0.3 +0.1 -0.7
carbon source D-Xylose (C) N.D. N.D. -0.3 +0.2 -0.7
carbon source D-Xylose (C) N.D. N.D. -0.1 +0.1 -0.8
carbon source L-Alanine (C) N.D. N.D. -0.2 +0.4 -0.9
carbon source Glycerol (C) N.D. N.D. -0.2 +0.3 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.2 -0.2 -0.7
carbon source L-Leucine (C) N.D. N.D. -0.2 +0.3 -0.8
carbon source L-Leucine (C) N.D. N.D. -0.2 +0.4 -0.8
carbon source L-Proline (C) N.D. N.D. -0.2 +0.4 -0.7
carbon source propionate (C) N.D. N.D. +0.5 -0.6 +0.1
carbon source D-Serine (C) N.D. N.D. +0.6 +0.2 -0.6
carbon source a-Ketoglutaric (C) N.D. N.D. +0.3 +0.7 +0.2
carbon source propionate (C) N.D. N.D. +1.4 +0.2 -0.2
remove
ABID97_RS12420
plot		 remove
ABID97_RS12425
plot		 remove
ABID97_RS12430		 remove
ABID97_RS12435
plot		 remove
ABID97_RS12440
plot