Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12155 and ABID97_RS12160 overlap by 4 nucleotidesABID97_RS12160 and ABID97_RS12165 overlap by 8 nucleotidesABID97_RS12165 and ABID97_RS12170 are separated by 776 nucleotidesABID97_RS12170 and ABID97_RS12175 are separated by 60 nucleotides ABID97_RS12155: ABID97_RS12155 - glycogen debranching protein GlgX, at 2,516,784 to 2,518,946 _RS12155 ABID97_RS12160: ABID97_RS12160 - malto-oligosyltrehalose trehalohydrolase, at 2,518,943 to 2,520,784 _RS12160 ABID97_RS12165: ABID97_RS12165 - malto-oligosyltrehalose synthase, at 2,520,777 to 2,525,831 _RS12165 ABID97_RS12170: ABID97_RS12170 - DUF6531 domain-containing protein, at 2,526,608 to 2,526,811 _RS12170 ABID97_RS12175: ABID97_RS12175 - RHS repeat-associated core domain-containing protein, at 2,526,872 to 2,530,612 _RS12175
Group Condition ABID97_RS12155 ABID97_RS12160 ABID97_RS12165 ABID97_RS12170 ABID97_RS12175
carbon source L-Histidine (C) -1.8 +0.1 +0.3 -0.5 -0.1
carbon source L-Proline (C) -2.5 +0.3 +0.1 +0.1 +0.0
carbon source D-Ribose (C) -1.2 +0.7 +0.2 -1.7 +0.3
carbon source L-Proline (C) -2.1 +0.4 +0.1 -0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.1 -0.1 -0.9 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.3 +0.0 -1.3 -0.6
carbon source L-Threonine (C) -1.2 +0.2 +0.1 -0.6 -0.1
carbon source L-Histidine (C) -1.7 +0.0 +0.3 -0.1 -0.0
carbon source D-Ribose (C) -1.6 +0.1 +0.2 -0.3 +0.1
carbon source pyruvate (C) -0.1 +0.1 +0.1 -1.3 +0.1
carbon source L-tyrosine (C) +0.2 -0.0 +0.2 -1.6 +0.1
carbon source Glycerol (C) -0.9 +0.5 +0.4 -1.2 -0.0
carbon source D,L-Lactate (C) -0.2 +0.2 +0.0 -1.2 +0.1
carbon source D-Arabinose (C) -0.5 +0.1 +0.0 -0.8 +0.1
carbon source Gly-Glu (C) -0.8 +0.1 +0.1 -0.6 +0.1
carbon source D-Glucose (C) -0.8 +0.2 +0.3 -0.7 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.4 -0.0 -0.9 -0.2
carbon source L-Threonine (C) -1.1 +0.0 +0.3 +0.0 -0.0
carbon source D-Xylose (C) -1.1 +0.3 +0.2 -0.1 +0.0
carbon source Glucuronamide (C) -1.0 +0.5 +0.3 -0.5 -0.0
carbon source D-Xylose (C) -1.3 +0.2 +0.1 +0.3 +0.2
carbon source D,L-Malic Acid (C) -1.2 +0.2 +0.2 +0.2 +0.0
carbon source D-Glucuronic Acid (C) -1.2 +0.4 +0.3 +0.1 +0.2
carbon source D-Mannose (C) +0.2 +0.3 +0.6 -1.3 -0.0
carbon source D-Glucose (C) -1.0 +0.7 +0.3 -0.2 +0.1
carbon source Glycerol (C) -1.1 +0.4 +0.3 +0.3 +0.0
carbon source butyrate (C) -1.0 +1.2 +0.9 -1.0 +0.0
carbon source Adenine (C) -0.8 +0.3 +0.3 +0.4 +0.1
carbon source butyrate (C) -1.2 +1.6 +0.9 -0.4 +0.3
phage V2_100 +0.2 -0.3 +0.1 +1.0 +0.3
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