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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS12125 and ABID97_RS12130 are separated by 30 nucleotides
ABID97_RS12130 and ABID97_RS12135 are separated by 201 nucleotides
ABID97_RS12135 and ABID97_RS12140 overlap by 4 nucleotides
ABID97_RS12140 and ABID97_RS12145 are separated by 10 nucleotides
ABID97_RS12125: ABID97_RS12125 - hypothetical protein, at 2,507,726 to 2,508,082
_RS12125
ABID97_RS12130: ABID97_RS12130 - hypothetical protein, at 2,508,113 to 2,508,433
_RS12130
ABID97_RS12135: ABID97_RS12135 - 1,4-alpha-glucan branching protein GlgB, at 2,508,635 to 2,510,533
_RS12135
ABID97_RS12140: ABID97_RS12140 - alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase, at 2,510,530 to 2,512,581
_RS12140
ABID97_RS12145: ABID97_RS12145 - maltose alpha-D-glucosyltransferase, at 2,512,592 to 2,515,924
_RS12145
Group
Condition
ABID97
_RS12125
ABID97
_RS12130
ABID97
_RS12135
ABID97
_RS12140
ABID97
_RS12145
carbon source
Gly-Glu (C)
+0.1
N.D.
-0.7
-4.2
+0.2
carbon source
Gly-Glu (C)
+0.3
N.D.
-0.6
-4.5
+0.2
carbon source
Glycolic Acid (C)
+0.2
N.D.
-0.9
-3.9
+0.2
carbon source
L-Histidine (C)
+0.1
N.D.
-0.6
-3.9
+0.5
carbon source
L-Histidine (C)
+0.0
N.D.
-0.3
-4.0
+0.4
carbon source
Glycerol (C)
-0.1
N.D.
-0.6
-3.3
+0.3
carbon source
D-Gluconic Acid (C)
-0.1
N.D.
-0.5
-2.9
-0.2
carbon source
Glycerol (C)
-0.4
N.D.
-0.5
-2.9
+0.2
carbon source
Glycolic Acid (C)
+0.2
N.D.
-0.5
-3.4
+0.1
carbon source
D-Glucuronic Acid (C)
-0.3
N.D.
-0.5
-3.3
+0.6
carbon source
D-Gluconic Acid (C)
-0.1
N.D.
-0.3
-2.9
-0.1
carbon source
L-Malic (C)
+0.1
N.D.
-0.2
-3.6
+0.4
carbon source
L-Proline (C)
-0.5
N.D.
-0.5
-2.5
+0.3
carbon source
L-Malic (C)
+0.2
N.D.
-0.1
-3.5
+0.2
carbon source
L-Alanine (C)
+0.3
N.D.
-0.2
-3.4
+0.1
carbon source
L-Alanine (C)
+0.2
N.D.
-0.2
-2.6
-0.1
carbon source
L-Leucine (C)
+0.2
N.D.
-0.3
-2.2
-0.4
carbon source
L-Proline (C)
+0.1
N.D.
-0.6
-2.5
+0.3
carbon source
acetate (C)
+0.0
N.D.
-0.2
-2.4
-0.1
carbon source
acetate (C)
+0.3
N.D.
-0.3
-2.2
-0.2
carbon source
succinate (C)
+0.3
N.D.
-0.3
-2.3
-0.0
carbon source
L-Lactate (C)
+0.1
N.D.
-0.2
-2.3
+0.1
carbon source
D-Glucose (C)
-0.2
N.D.
-0.0
-2.2
+0.2
carbon source
L-Leucine (C)
+0.2
N.D.
-0.2
-1.9
-0.3
carbon source
L-Threonine (C)
+0.3
N.D.
-0.3
-2.3
+0.1
carbon source
D-Xylose (C)
+0.2
N.D.
-0.3
-2.2
+0.1
carbon source
D,L-Malic Acid (C)
-0.3
N.D.
-0.6
-1.5
+0.6
carbon source
D-Glucose (C)
+0.5
N.D.
-0.1
-2.2
+0.2
carbon source
butyrate (C)
+0.2
N.D.
-0.4
-0.4
+1.8
carbon source
butyrate (C)
-0.0
N.D.
-0.5
+0.0
+2.0
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