Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS12095 and ABID97_RS12100 overlap by 4 nucleotidesABID97_RS12100 and ABID97_RS12105 are separated by 231 nucleotidesABID97_RS12105 and ABID97_RS12110 are separated by 11 nucleotidesABID97_RS12110 and ABID97_RS12115 are separated by 144 nucleotides ABID97_RS12095: ABID97_RS12095 - hypothetical protein, at 2,502,672 to 2,503,145 _RS12095 ABID97_RS12100: ABID97_RS12100 - PAAR domain-containing protein, at 2,503,142 to 2,504,173 _RS12100 ABID97_RS12105: ABID97_RS12105 - erythromycin esterase family protein, at 2,504,405 to 2,505,751 _RS12105 ABID97_RS12110: ABID97_RS12110 - phosphoribosyltransferase family protein, at 2,505,763 to 2,506,428 _RS12110 ABID97_RS12115: ABID97_RS12115 - Hsp20/alpha crystallin family protein, at 2,506,573 to 2,506,980 _RS12115
Group Condition ABID97_RS12095 ABID97_RS12100 ABID97_RS12105 ABID97_RS12110 ABID97_RS12115
carbon source D,L-Malic Acid (C) -0.3 +0.1 -0.3 -4.6 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.1 +0.2 -4.5 +0.1
carbon source Gly-Glu (C) -0.5 -0.3 -0.1 -1.7 +0.1
carbon source D-Arabinose (C) -0.5 -0.5 +0.0 -1.3 +0.1
carbon source Ethanol (C) -0.6 +0.0 -0.4 -1.0 -0.0
carbon source L-Alanine (C) -0.4 -0.1 +0.0 -1.8 +0.4
carbon source Glucuronamide (C) -0.6 +0.1 -0.1 -1.4 +0.1
carbon source L-Arabinose (C) -0.9 -0.3 -0.1 -0.7 +0.2
carbon source L-Leucine (C) -0.4 -0.2 -0.1 -1.1 -0.1
carbon source D,L-Malic Acid (C) -0.5 -0.3 -0.3 -0.3 -0.3
carbon source Tween 20 (C) -0.5 -0.4 -0.3 -0.2 -0.2
carbon source L-Threonine (C) -0.4 -0.2 -0.1 -0.9 -0.0
carbon source D-Ribose (C) -0.3 -0.2 -0.1 -0.7 -0.2
carbon source L-Asparagine (C) -0.7 -0.1 -0.1 -0.4 -0.1
carbon source butyrate (C) -0.2 -0.2 -0.0 -1.0 -0.1
carbon source D-Gluconic Acid (C) -0.7 -0.2 -0.2 -0.2 -0.2
r2a outgrowth control R2A outgrowth control -0.8 -0.0 -0.1 -0.3 -0.1
carbon source L-Histidine (C) -0.4 +0.1 -0.2 -0.9 -0.0
carbon source L-Lactate (C) -0.3 -0.2 -0.1 -0.8 +0.1
carbon source D-Glucose (C) -0.2 -0.1 +0.1 -0.7 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.3 -0.5 +0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.4 -0.3 +0.7 -0.0
carbon source L-tyrosine (C) -0.4 -0.3 -0.2 +0.8 +0.1
carbon source D-Arabinose (C) -0.5 -0.0 +0.0 +0.9 -0.1
carbon source casaminos (C) -0.2 -0.1 -0.1 +0.8 +0.1
carbon source L-Fucose (C) -0.5 +0.1 +0.1 +0.9 -0.1
control NP +0.2 +0.2 +0.0 +0.9 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.1 -0.2 +2.0 +0.0
phage V2_1 +0.4 +0.1 +0.1 +1.0 +0.1
phage V2_100 -0.6 +0.4 -0.3 +2.1 +0.2
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ABID97_RS12095
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ABID97_RS12100
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