Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS11965 and ABID97_RS11970 are separated by 80 nucleotidesABID97_RS11970 and ABID97_RS11975 are separated by 9 nucleotidesABID97_RS11975 and ABID97_RS11980 are separated by 206 nucleotidesABID97_RS11980 and ABID97_RS11985 are separated by 33 nucleotides ABID97_RS11965: ABID97_RS11965 - PAS domain S-box protein, at 2,468,363 to 2,472,973 _RS11965 ABID97_RS11970: ABID97_RS11970 - chemotaxis protein CheB, at 2,473,054 to 2,474,067 _RS11970 ABID97_RS11975: ABID97_RS11975 - manganese catalase family protein, at 2,474,077 to 2,474,997 _RS11975 ABID97_RS11980: ABID97_RS11980 - KGG domain-containing protein, at 2,475,204 to 2,475,410 _RS11980 ABID97_RS11985: ABID97_RS11985 - hypothetical protein, at 2,475,444 to 2,476,013 _RS11985
Group Condition ABID97_RS11965 ABID97_RS11970 ABID97_RS11975 ABID97_RS11980 ABID97_RS11985
carbon source L-Histidine (C) +0.1 N.D. -0.4 N.D. -1.1
r2a outgrowth control R2A outgrowth control -0.1 N.D. -0.3 N.D. -0.5
carbon source L-tyrosine (C) +0.2 N.D. -0.5 N.D. -0.4
carbon source L-Alanine (C) +0.1 N.D. +0.6 N.D. -1.2
carbon source Glycolic Acid (C) +0.3 N.D. +0.2 N.D. -0.9
carbon source L-tyrosine (C) -0.1 N.D. +0.2 N.D. -0.5
carbon source D,L-Lactate (C) +0.2 N.D. +0.1 N.D. -0.6
carbon source L-Lactate (C) +0.1 N.D. +0.3 N.D. -0.6
plant outgrowth control Plant outgrowth control +0.0 N.D. +0.3 N.D. -0.6
carbon source D-Gluconic Acid (C) +0.1 N.D. +0.2 N.D. -0.5
phage V1_1 -0.1 N.D. -0.3 N.D. +0.4
carbon source D-Arabinose (C) -0.0 N.D. -0.3 N.D. +0.4
carbon source butyrate (C) -0.3 N.D. -0.3 N.D. +0.8
phage V2_10 -0.2 N.D. +0.1 N.D. +0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.1 N.D. +0.2 N.D. +0.4
carbon source D-Arabinose (C) +0.2 N.D. -0.0 N.D. +0.5
carbon source D-Fructose (C) +0.3 N.D. -0.0 N.D. +0.4
carbon source D-Lactate (C) +0.2 N.D. +0.2 N.D. +0.3
carbon source D-Sorbitol (C) -0.1 N.D. +0.5 N.D. +0.3
carbon source D-Glucuronic Acid (C) -0.1 N.D. -0.0 N.D. +0.9
carbon source 2-Deoxy-D-Ribose (C) +0.1 N.D. +0.1 N.D. +0.5
carbon source Formate (C) +0.0 N.D. +0.1 N.D. +0.6
carbon source L-Leucine (C) +0.1 N.D. +0.2 N.D. +0.6
carbon source Glucuronamide (C) -0.1 N.D. +0.3 N.D. +0.6
carbon source D-Ribose (C) +0.1 N.D. +0.3 N.D. +0.4
carbon source propionate (C) +0.0 N.D. +1.1 N.D. -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.1 N.D. +0.5 N.D. +0.6
phage V2_100 -0.1 N.D. +0.0 N.D. +1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. +0.8 N.D. +1.1
carbon source propionate (C) +0.1 N.D. +0.3 N.D. +1.1
remove
ABID97_RS11965
plot		 remove
ABID97_RS11970
plot		 remove
ABID97_RS11975		 remove
ABID97_RS11980
plot		 remove
ABID97_RS11985
plot