Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11885 and ABID97_RS11890 overlap by 4 nucleotidesABID97_RS11890 and ABID97_RS11895 overlap by 11 nucleotidesABID97_RS11895 and ABID97_RS11900 overlap by 13 nucleotidesABID97_RS11900 and ABID97_RS11905 overlap by 4 nucleotides ABID97_RS11885: ABID97_RS11885 - zinc-binding dehydrogenase, at 2,454,940 to 2,455,893 _RS11885 ABID97_RS11890: ABID97_RS11890 - Gfo/Idh/MocA family oxidoreductase, at 2,455,890 to 2,456,954 _RS11890 ABID97_RS11895: ABID97_RS11895 - glycosyltransferase family 4 protein, at 2,456,944 to 2,458,095 _RS11895 ABID97_RS11900: ABID97_RS11900 - glycosyltransferase, at 2,458,083 to 2,459,204 _RS11900 ABID97_RS11905: ABID97_RS11905 - glycosyltransferase, at 2,459,201 to 2,460,310 _RS11905
Group Condition ABID97_RS11885 ABID97_RS11890 ABID97_RS11895 ABID97_RS11900 ABID97_RS11905
phage V1_10 -0.3 -0.4 +0.3 -0.5 -0.1
phage V1_10 -0.1 -0.1 +0.2 -0.4 -0.6
carbon source L-Alanine (C) +0.2 -2.0 +0.7 -0.1 +0.3
carbon source acetate (C) -0.1 -0.0 +0.2 +0.3 -0.7
carbon source D,L-Malic Acid (C) -0.3 +0.7 +0.2 -0.0 -0.2
carbon source D-Arabinose (C) +0.2 -0.6 +0.4 -0.0 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.1 +0.7 -0.4 +0.2
carbon source Formate (C) +0.1 +0.3 +0.3 -0.4 +0.4
r2a outgrowth control R2A outgrowth control -0.1 +0.1 +0.7 +0.2 -0.3
carbon source L-Arabinose (C) +0.1 -0.5 +0.7 +0.0 +0.2
carbon source butyrate (C) +0.2 -0.4 +0.2 +0.5 +0.1
carbon source casaminos (C) +0.2 -0.4 +0.5 -0.3 +0.8
carbon source D-Serine (C) -0.0 -0.1 +0.9 -0.3 +0.2
carbon source Adenine (C) +0.3 -0.3 +0.7 -0.1 +0.1
carbon source D-Glucose (C) -0.0 -0.0 +0.8 +0.3 -0.3
carbon source L-Glutamine (C) +0.2 +0.5 +0.2 -0.4 +0.4
carbon source propionate (C) +0.1 +0.6 +0.4 -0.3 +0.2
carbon source L-tyrosine (C) -0.0 -0.1 +0.6 -0.0 +0.6
carbon source Glucuronamide (C) +0.2 +0.2 +0.4 +0.5 -0.2
carbon source L-Glutamine (C) +0.2 +0.0 +0.1 -0.2 +1.0
carbon source D-Serine (C) +0.2 +0.5 +0.5 -0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.2 +0.9 +0.1 -0.1
carbon source L-Histidine (C) +0.4 -0.2 +1.2 -0.4 +0.3
carbon source D-Xylose (C) +0.0 +0.4 +0.5 +0.5 -0.1
carbon source Ethanol (C) +0.2 +0.5 +0.2 +0.0 +0.5
carbon source 2-Deoxy-D-Ribose (C) -0.0 +0.3 +0.6 +0.3 +0.3
carbon source L-Asparagine (C) +0.0 +0.5 +0.5 -0.2 +0.6
carbon source casaminos (C) +0.1 +0.5 +0.5 -0.0 +0.4
carbon source L-Fucose (C) +0.1 +0.3 +0.5 +0.2 +0.3
phage V2_100 +0.1 +0.7 +0.9 -0.1 +0.2
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ABID97_RS11885
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ABID97_RS11890
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