Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS11845 and ABID97_RS11850 overlap by 1 nucleotidesABID97_RS11850 and ABID97_RS11855 are separated by 201 nucleotidesABID97_RS11855 and ABID97_RS11860 are separated by 52 nucleotidesABID97_RS11860 and ABID97_RS11865 overlap by 82 nucleotides ABID97_RS11845: ABID97_RS11845 - hypothetical protein, at 2,445,405 to 2,447,153 _RS11845 ABID97_RS11850: ABID97_RS11850 - dual specificity protein phosphatase, at 2,447,153 to 2,447,683 _RS11850 ABID97_RS11855: ABID97_RS11855 - UDP-glucose/GDP-mannose dehydrogenase family protein, at 2,447,885 to 2,449,270 _RS11855 ABID97_RS11860: ABID97_RS11860 - UDP-glucuronic acid decarboxylase family protein, at 2,449,323 to 2,450,372 _RS11860 ABID97_RS11865: ABID97_RS11865 - beta-xylosidase, at 2,450,291 to 2,451,247 _RS11865
Group Condition ABID97_RS11845 ABID97_RS11850 ABID97_RS11855 ABID97_RS11860 ABID97_RS11865
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.0 -0.7 -0.8
carbon source D-Arabinose (C) N.D. N.D. -0.3 -0.9 -0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.0 -1.0 -0.3
carbon source a-Ketoglutaric (C) N.D. N.D. -0.4 +0.1 -1.0
carbon source L-Alanine (C) N.D. N.D. -0.2 -0.4 -0.6
phage V1_10 N.D. N.D. -0.2 +0.0 -1.0
carbon source Glucuronamide (C) N.D. N.D. +0.0 -0.8 -0.4
carbon source D-Serine (C) N.D. N.D. +0.1 +0.0 -1.2
phage V1_10 N.D. N.D. -0.1 -0.6 -0.3
carbon source Adenine (C) N.D. N.D. -0.5 -0.4 -0.1
carbon source D,L-Malic Acid (C) N.D. N.D. -0.3 -0.7 +0.1
carbon source Adenine (C) N.D. N.D. -0.6 +0.0 -0.4
carbon source D-Ribose (C) N.D. N.D. -0.2 -0.2 -0.5
carbon source Tween 20 (C) N.D. N.D. +0.1 -0.2 -0.5
carbon source D-Serine (C) N.D. N.D. +0.1 +0.1 -0.8
carbon source D-Xylose (C) N.D. N.D. +0.2 -0.6 -0.1
carbon source D,L-Malic Acid (C) N.D. N.D. -0.4 -0.2 +0.2
carbon source pyruvate (C) N.D. N.D. +0.4 -0.5 -0.3
phage V2_100 N.D. N.D. -0.8 +0.4 +0.1
phage V2_10 N.D. N.D. -0.2 +0.3 -0.4
carbon source L-Glutamic (C) N.D. N.D. +0.2 -0.5 +0.2
carbon source L-Malic (C) N.D. N.D. +0.3 -0.5 +0.1
carbon source D-Galactose (C) N.D. N.D. +0.1 -0.4 +0.3
r2a outgrowth control R2A outgrowth control N.D. N.D. -0.4 -0.2 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.2 -0.3 +0.6
carbon source L-Glutamic (C) N.D. N.D. +0.2 -0.2 +0.4
carbon source L-Histidine (C) N.D. N.D. +0.5 -0.3 +0.3
carbon source propionate (C) N.D. N.D. +0.5 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.4 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.3 +1.4 +0.9
remove
ABID97_RS11845
plot		 remove
ABID97_RS11850
plot		 remove
ABID97_RS11855		 remove
ABID97_RS11860
plot		 remove
ABID97_RS11865
plot