Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11785 and ABID97_RS11790 are separated by 114 nucleotidesABID97_RS11790 and ABID97_RS11795 are separated by 103 nucleotidesABID97_RS11795 and ABID97_RS11800 are separated by 94 nucleotidesABID97_RS11800 and ABID97_RS11805 are separated by 178 nucleotides ABID97_RS11785: ABID97_RS11785 - TRAP transporter substrate-binding protein, at 2,436,189 to 2,437,208 _RS11785 ABID97_RS11790: ABID97_RS11790 - LacI family DNA-binding transcriptional regulator, at 2,437,323 to 2,438,372 _RS11790 ABID97_RS11795: ABID97_RS11795 - Crp/Fnr family transcriptional regulator, at 2,438,476 to 2,439,192 _RS11795 ABID97_RS11800: ABID97_RS11800 - Crp/Fnr family transcriptional regulator, at 2,439,287 to 2,440,003 _RS11800 ABID97_RS11805: ABID97_RS11805 - response regulator transcription factor, at 2,440,182 to 2,440,685 _RS11805
Group Condition ABID97_RS11785 ABID97_RS11790 ABID97_RS11795 ABID97_RS11800 ABID97_RS11805
carbon source D,L-Malic Acid (C) -1.3 -0.6 +0.5 +0.0 N.D.
phage V2_10 -0.8 +0.3 -0.1 -0.1 N.D.
carbon source L-Histidine (C) -1.3 +0.7 -0.1 -0.0 N.D.
carbon source Glucuronamide (C) -0.7 +0.0 +0.1 +0.2 N.D.
carbon source D,L-Lactate (C) -0.7 +0.5 -0.1 -0.0 N.D.
carbon source propionate (C) +0.7 -0.2 -0.4 -0.2 N.D.
carbon source pyruvate (C) +0.4 -0.7 -0.1 +0.2 N.D.
carbon source L-Phenylalanine (C) -0.3 +0.5 +0.1 -0.4 N.D.
carbon source L-Alanine (C) -0.4 +0.4 -0.1 +0.2 N.D.
carbon source L-tyrosine (C) -1.1 +0.1 +1.0 +0.2 N.D.
carbon source Tween 20 (C) -0.5 +0.1 +0.1 +0.3 N.D.
carbon source L-Alanine (C) +0.2 +0.5 -0.1 -0.4 N.D.
carbon source succinate (C) -0.4 +0.4 +0.1 +0.4 N.D.
carbon source Tween 20 (C) -0.3 +0.4 +0.1 +0.5 N.D.
carbon source L-Phenylalanine (C) -0.2 +0.6 +0.0 +0.3 N.D.
r2a outgrowth control R2A outgrowth control -0.2 +0.7 +0.2 -0.0 N.D.
carbon source L-tyrosine (C) +0.7 -0.1 +0.3 -0.2 N.D.
carbon source casaminos (C) +0.9 -0.1 -0.1 +0.0 N.D.
phage V2_100 -0.3 +1.3 -0.1 -0.1 N.D.
carbon source D-Glucose (C) -0.3 +0.8 +0.3 +0.1 N.D.
carbon source propionate (C) +0.9 +0.3 -0.1 -0.1 N.D.
carbon source D,L-Lactate (C) +0.4 +0.5 +0.0 +0.2 N.D.
carbon source a-Ketoglutaric (C) -0.1 +0.5 +0.8 +0.1 N.D.
carbon source D-Mannose (C) +0.9 +0.1 +0.3 +0.0 N.D.
carbon source L-Asparagine (C) +0.8 +0.4 -0.1 +0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.5 +0.5 +0.3 +0.0 N.D.
carbon source L-Tryptophan (C) +0.5 +0.3 +0.3 +0.1 N.D.
plant outgrowth control Plant outgrowth control +0.6 +0.3 +0.2 +0.3 N.D.
carbon source Adenine (C) +0.6 +0.6 +0.2 -0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.9 +0.6 +0.1 N.D.
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