Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS11735 and ABID97_RS11740 are separated by 371 nucleotidesABID97_RS11740 and ABID97_RS11745 are separated by 434 nucleotidesABID97_RS11745 and ABID97_RS11750 are separated by 81 nucleotidesABID97_RS11750 and ABID97_RS11755 are separated by 55 nucleotides ABID97_RS11735: ABID97_RS11735 - PDR/VanB family oxidoreductase, at 2,426,992 to 2,427,963 _RS11735 ABID97_RS11740: ABID97_RS11740 - JAB domain-containing protein, at 2,428,335 to 2,428,472 _RS11740 ABID97_RS11745: ABID97_RS11745 - ParB N-terminal domain-containing protein, at 2,428,907 to 2,429,179 _RS11745 ABID97_RS11750: ABID97_RS11750 - trimeric intracellular cation channel family protein, at 2,429,261 to 2,429,878 _RS11750 ABID97_RS11755: ABID97_RS11755 - dihydrofolate reductase family protein, at 2,429,934 to 2,430,590 _RS11755
Group Condition ABID97_RS11735 ABID97_RS11740 ABID97_RS11745 ABID97_RS11750 ABID97_RS11755
carbon source Adenine (C) -0.1 -0.1 N.D. -2.1 N.D.
carbon source L-Histidine (C) -0.0 -0.1 N.D. -1.9 N.D.
carbon source D-Serine (C) -0.5 -0.8 N.D. -0.5 N.D.
carbon source L-Histidine (C) +0.1 -0.3 N.D. -1.6 N.D.
carbon source D-Arabinose (C) -0.1 -1.0 N.D. -0.7 N.D.
r2a outgrowth control R2A outgrowth control -0.5 -0.8 N.D. -0.5 N.D.
carbon source L-Arabinose (C) -0.6 -0.7 N.D. -0.4 N.D.
carbon source Tween 20 (C) +0.1 -0.8 N.D. -0.9 N.D.
carbon source L-Tryptophan (C) -0.3 -1.0 N.D. -0.2 N.D.
carbon source L-Alanine (C) -0.2 -0.9 N.D. -0.4 N.D.
carbon source casaminos (C) +0.0 -0.8 N.D. -0.6 N.D.
carbon source a-Ketoglutaric (C) -0.7 -0.6 N.D. -0.1 N.D.
carbon source L-Proline (C) -0.0 -0.6 N.D. -0.7 N.D.
carbon source L-Threonine (C) -0.0 -1.1 N.D. -0.2 N.D.
carbon source propionate (C) +0.4 -1.1 N.D. -0.3 N.D.
carbon source D,L-Malic Acid (C) +0.3 +0.4 N.D. -1.6 N.D.
carbon source D-Gluconic Acid (C) +0.4 -1.3 N.D. +0.0 N.D.
carbon source L-Threonine (C) +0.5 -0.3 N.D. -1.0 N.D.
carbon source butyrate (C) +0.5 -0.0 N.D. -1.0 N.D.
carbon source L-Malic (C) -0.1 -0.8 N.D. +0.6 N.D.
carbon source pyruvate (C) +0.4 -0.9 N.D. +0.4 N.D.
carbon source D,L-Malic Acid (C) +0.0 -0.7 N.D. +0.7 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +1.8 N.D. -1.1 N.D.
phage V1_10 -0.4 +0.7 N.D. -0.2 N.D.
carbon source D,L-Lactate (C) +0.1 -0.8 N.D. +0.9 N.D.
carbon source Glucuronamide (C) -0.5 +0.7 N.D. +0.1 N.D.
carbon source L-tyrosine (C) -0.1 -1.1 N.D. +1.6 N.D.
carbon source Ethanol (C) +0.4 -0.5 N.D. +0.6 N.D.
carbon source L-Alanine (C) +0.5 +0.2 N.D. +0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +2.9 N.D. +0.2 N.D.
remove
ABID97_RS11735
plot		 remove
ABID97_RS11740
plot		 remove
ABID97_RS11745		 remove
ABID97_RS11750
plot		 remove
ABID97_RS11755
plot