Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11635 and ABID97_RS11640 are separated by 245 nucleotidesABID97_RS11640 and ABID97_RS11645 are separated by 275 nucleotidesABID97_RS11645 and ABID97_RS11650 are separated by 10 nucleotidesABID97_RS11650 and ABID97_RS11655 are separated by 81 nucleotides ABID97_RS11635: ABID97_RS11635 - branched-chain amino acid ABC transporter substrate-binding protein, at 2,403,314 to 2,404,585 _RS11635 ABID97_RS11640: ABID97_RS11640 - TetR family transcriptional regulator, at 2,404,831 to 2,405,472 _RS11640 ABID97_RS11645: ABID97_RS11645 - glutamine amidotransferase, at 2,405,748 to 2,406,488 _RS11645 ABID97_RS11650: ABID97_RS11650 - carbon-nitrogen hydrolase family protein, at 2,406,499 to 2,407,419 _RS11650 ABID97_RS11655: ABID97_RS11655 - LysR family transcriptional regulator, at 2,407,501 to 2,408,421 _RS11655
Group Condition ABID97_RS11635 ABID97_RS11640 ABID97_RS11645 ABID97_RS11650 ABID97_RS11655
carbon source D-Gluconic Acid (C) +0.1 -6.2 +0.4 +0.1 +0.0
carbon source D-Gluconic Acid (C) +0.0 -5.8 +0.4 +0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.4 -1.2 -0.2 -0.1
carbon source D-Glucuronic Acid (C) +0.3 -3.6 -1.1 +0.1 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -2.5 -0.6 -0.0 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -3.1 -0.5 -0.0 +0.5
carbon source D-Glucose (C) +0.0 -3.4 +0.2 +0.1 +0.1
carbon source L-Histidine (C) -0.0 -3.2 +0.2 +0.1 +0.2
carbon source L-Histidine (C) +0.1 -2.8 -0.5 +0.1 +0.4
carbon source D-Xylose (C) -0.1 -2.6 -0.1 +0.0 +0.1
carbon source Gly-Glu (C) +0.2 -3.4 +0.4 +0.2 +0.1
carbon source D-Glucose (C) -0.1 -3.2 +0.8 +0.0 +0.2
carbon source L-Alanine (C) -0.2 -1.8 -0.5 +0.1 +0.2
carbon source D-Xylose (C) +0.1 -2.8 +0.6 +0.1 +0.1
carbon source Gly-Glu (C) +0.1 -2.5 +0.6 +0.2 -0.3
plant outgrowth control Plant outgrowth control +0.1 -0.8 -1.2 +0.1 -0.1
carbon source L-Leucine (C) +0.1 -2.1 +0.3 -0.2 -0.0
carbon source a-Ketoglutaric (C) -0.3 -1.2 -0.5 +0.0 +0.2
carbon source Glycerol (C) +0.3 -1.6 -0.3 -0.0 -0.0
carbon source L-Tryptophan (C) -0.1 -1.8 +0.3 +0.1 +0.0
carbon source D-Sorbitol (C) -0.0 -1.1 -0.7 +0.2 +0.2
carbon source L-Leucine (C) +0.3 -1.8 +0.3 +0.2 -0.1
carbon source L-Proline (C) +0.2 -1.7 +0.4 +0.0 -0.1
carbon source Adenine (C) +0.2 -1.7 +0.4 -0.2 +0.1
carbon source L-Proline (C) +0.0 -1.7 +0.5 +0.2 +0.1
carbon source D-Mannose (C) +0.0 -1.6 +0.6 +0.0 -0.0
carbon source L-Alanine (C) -0.0 -1.6 +0.6 +0.1 +0.2
carbon source L-Tryptophan (C) +0.2 -1.3 +0.2 +0.1 +0.3
carbon source a-Ketoglutaric (C) +0.1 -0.9 +1.0 +0.0 -0.3
carbon source Adenine (C) +0.3 -1.4 +0.9 -0.1 +0.2
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