Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11565 and ABID97_RS11570 are separated by 288 nucleotidesABID97_RS11570 and ABID97_RS11575 are separated by 255 nucleotidesABID97_RS11575 and ABID97_RS11580 are separated by 70 nucleotidesABID97_RS11580 and ABID97_RS11585 are separated by 82 nucleotides ABID97_RS11565: ABID97_RS11565 - indolepyruvate ferredoxin oxidoreductase subunit alpha, at 2,387,586 to 2,389,748 _RS11565 ABID97_RS11570: ABID97_RS11570 - carbon-nitrogen hydrolase family protein, at 2,390,037 to 2,391,050 _RS11570 ABID97_RS11575: ABID97_RS11575 - phosphotransferase, at 2,391,306 to 2,392,385 _RS11575 ABID97_RS11580: ABID97_RS11580 - SDR family oxidoreductase, at 2,392,456 to 2,393,157 _RS11580 ABID97_RS11585: ABID97_RS11585 - glucose 1-dehydrogenase, at 2,393,240 to 2,393,989 _RS11585
Group Condition ABID97_RS11565 ABID97_RS11570 ABID97_RS11575 ABID97_RS11580 ABID97_RS11585
carbon source butyrate (C) -0.4 -0.2 -0.4 -0.2 N.D.
carbon source D-Xylose (C) -0.4 -0.3 -0.0 -0.3 N.D.
carbon source Glucuronamide (C) -0.3 -0.1 -0.1 -0.6 N.D.
carbon source Ethanol (C) -0.1 -0.2 +0.2 -0.8 N.D.
carbon source D-Glucose (C) -0.8 -0.2 +0.2 -0.2 N.D.
carbon source L-Leucine (C) -0.5 -0.2 +0.1 -0.4 N.D.
carbon source L-Threonine (C) -0.6 +0.1 -0.2 -0.2 N.D.
carbon source L-Alanine (C) -0.6 -0.2 -0.0 -0.1 N.D.
carbon source L-Arabinose (C) -0.4 -0.1 -0.0 -0.4 N.D.
carbon source D,L-Malic Acid (C) -0.2 +0.1 -0.3 -0.5 N.D.
r2a outgrowth control R2A outgrowth control -0.3 +0.0 -0.1 -0.4 N.D.
carbon source Formate (C) -0.2 -0.2 +0.1 -0.5 N.D.
carbon source a-Ketoglutaric (C) -0.5 -0.2 +0.2 -0.2 N.D.
carbon source L-tyrosine (C) -0.6 -0.2 +0.5 -0.4 N.D.
carbon source L-Leucine (C) -0.4 -0.3 +0.2 -0.1 N.D.
carbon source Gly-Glu (C) -0.4 -0.1 +0.2 -0.3 N.D.
carbon source Fumarate (C) -0.0 -0.2 +0.2 -0.5 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.6 -0.2 +0.1 +0.2 N.D.
carbon source Gly-Glu (C) -0.4 -0.2 +0.1 +0.2 N.D.
carbon source L-Glutamic (C) -0.3 -0.3 -0.2 +0.3 N.D.
carbon source Fumarate (C) +0.3 -0.3 +0.1 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 +0.2 -0.5 N.D.
r2a outgrowth control R2A outgrowth control -0.1 +0.0 -0.5 +0.3 N.D.
r2a outgrowth control R2A outgrowth control -0.5 -0.1 -0.1 +0.6 N.D.
phage V2_100 -0.1 -0.1 -0.3 +0.5 N.D.
carbon source D-Glucose (C) -0.4 +0.1 +0.2 +0.3 N.D.
carbon source D-Fructose (C) +0.3 -0.2 +0.1 +0.2 N.D.
carbon source L-Glutamine (C) +0.2 -0.2 +0.2 +0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 +0.3 +0.2 +0.8 N.D.
carbon source propionate (C) -0.2 +0.5 +0.3 +0.1 N.D.
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