Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11510 and ABID97_RS11515 overlap by 4 nucleotidesABID97_RS11515 and ABID97_RS11520 are separated by 41 nucleotidesABID97_RS11520 and ABID97_RS11525 are separated by 116 nucleotidesABID97_RS11525 and ABID97_RS11530 are separated by 11 nucleotides ABID97_RS11510: ABID97_RS11510 - ATP-binding cassette domain-containing protein, at 2,375,758 to 2,377,446 _RS11510 ABID97_RS11515: ABID97_RS11515 - ATP-binding cassette domain-containing protein, at 2,377,443 to 2,378,138 _RS11515 ABID97_RS11520: ABID97_RS11520 - LysR family transcriptional regulator, at 2,378,180 to 2,379,076 _RS11520 ABID97_RS11525: ABID97_RS11525 - enolase C-terminal domain-like protein, at 2,379,193 to 2,380,287 _RS11525 ABID97_RS11530: ABID97_RS11530 - ABC transporter ATP-binding protein, at 2,380,299 to 2,381,027 _RS11530
Group Condition ABID97_RS11510 ABID97_RS11515 ABID97_RS11520 ABID97_RS11525 ABID97_RS11530
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.2 +0.2 -1.4 -0.7
carbon source D-Arabinose (C) -0.0 -0.6 -0.8 -0.9 +0.2
carbon source Tween 20 (C) +0.3 -2.7 -0.4 +0.4 +0.4
carbon source L-Phenylalanine (C) +0.2 -0.4 -0.5 -1.1 -0.3
carbon source L-Proline (C) -0.1 -0.4 +0.1 -1.6 -0.0
carbon source L-Histidine (C) +0.5 -0.5 -0.5 -1.0 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.3 -0.6 +0.4 -0.4
carbon source Adenine (C) -1.2 +0.2 +0.2 -0.9 +0.2
carbon source D,L-Malic Acid (C) -0.9 -0.2 +0.2 -0.1 -0.2
carbon source D-Sorbitol (C) +0.6 -0.5 -0.6 -0.5 +0.0
carbon source casaminos (C) +0.1 -0.6 -0.5 +0.3 -0.2
carbon source propionate (C) +0.9 -1.1 -0.2 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.6 -0.5 -0.2 -0.4
carbon source D-Gluconic Acid (C) +0.5 -0.1 -0.2 -0.7 +0.2
carbon source L-Histidine (C) +0.3 -0.2 -0.3 -0.4 +0.5
carbon source acetate (C) -0.5 +0.1 -0.3 +0.9 -0.3
carbon source L-Phenylalanine (C) +0.8 -0.2 -0.4 -0.0 -0.4
carbon source succinate (C) +0.4 -0.6 -0.0 +0.6 -0.4
r2a outgrowth control R2A outgrowth control -0.8 +0.4 -0.1 +0.7 -0.2
carbon source Glucuronamide (C) +0.6 +0.1 +0.5 -0.7 -0.3
carbon source Gly-Glu (C) +0.6 -0.3 -0.4 +0.4 +0.1
carbon source Ethanol (C) +0.4 +0.4 +0.1 +0.2 -0.7
carbon source Glycolic Acid (C) +0.7 -0.3 -0.3 +0.4 +0.0
carbon source D-Glucuronic Acid (C) +0.8 -0.1 -0.3 -0.1 +0.5
carbon source butyrate (C) +0.7 -0.4 +0.0 +0.6 +0.2
carbon source L-Alanine (C) -0.1 +0.1 -0.4 +1.2 +0.5
carbon source D-Arabinose (C) +0.8 -0.3 +0.1 +0.7 -0.0
carbon source Gly-Glu (C) +0.6 +0.1 -0.4 +0.8 +0.3
carbon source L-Arabinose (C) +0.5 -0.2 +0.1 +0.9 +0.1
carbon source L-tyrosine (C) +0.9 +0.3 +0.7 +1.1 -0.1
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