Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11490 and ABID97_RS11495 are separated by 174 nucleotidesABID97_RS11495 and ABID97_RS11500 are separated by 46 nucleotidesABID97_RS11500 and ABID97_RS11505 are separated by 7 nucleotidesABID97_RS11505 and ABID97_RS11510 are separated by 97 nucleotides ABID97_RS11490: ABID97_RS11490 - helix-turn-helix transcriptional regulator, at 2,371,249 to 2,372,022 _RS11490 ABID97_RS11495: ABID97_RS11495 - indoleacetamide hydrolase, at 2,372,197 to 2,373,603 _RS11495 ABID97_RS11500: ABID97_RS11500 - substrate-binding domain-containing protein, at 2,373,650 to 2,374,798 _RS11500 ABID97_RS11505: ABID97_RS11505 - branched-chain amino acid ABC transporter permease, at 2,374,806 to 2,375,660 _RS11505 ABID97_RS11510: ABID97_RS11510 - ATP-binding cassette domain-containing protein, at 2,375,758 to 2,377,446 _RS11510
Group Condition ABID97_RS11490 ABID97_RS11495 ABID97_RS11500 ABID97_RS11505 ABID97_RS11510
carbon source D-Serine (C) +0.0 -1.2 -0.2 -0.3 -0.1
r2a outgrowth control R2A outgrowth control -0.0 -0.6 -0.1 +0.2 -0.8
carbon source D-Mannose (C) -0.1 -1.2 -0.0 -0.1 +0.1
carbon source D,L-Malic Acid (C) -0.6 +0.1 +0.2 -0.1 -0.9
carbon source propionate (C) +0.3 -0.9 +0.2 -0.4 -0.2
carbon source L-Histidine (C) +0.3 -1.0 -0.2 -0.3 +0.3
carbon source pyruvate (C) -0.3 -0.7 -0.1 -0.1 +0.3
carbon source L-Arabinose (C) -0.7 -0.4 +0.2 -0.3 +0.5
carbon source Gly-Glu (C) -0.5 -0.4 +0.0 -0.4 +0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -1.0 +0.2 -0.1 -0.2
r2a outgrowth control R2A outgrowth control -0.4 -1.0 +0.1 +0.6 +0.1
plant outgrowth control Plant outgrowth control +0.3 -0.5 -0.3 +0.5 -0.5
carbon source L-tyrosine (C) -0.9 -0.7 +0.2 +0.2 +0.9
carbon source D-Xylose (C) -0.4 -0.2 +0.1 -0.3 +0.6
carbon source Adenine (C) -0.1 +1.2 -0.3 +0.2 -1.2
carbon source D-Arabinose (C) -0.2 -0.8 -0.0 +0.1 +0.8
phage V1_10 +0.4 +0.6 -0.1 -0.4 -0.3
phage V2_100 +0.7 -0.6 +0.3 -0.3 +0.2
carbon source Glycolic Acid (C) -0.5 +0.1 +0.1 -0.1 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.4 +0.2 +0.3 -0.5
carbon source D-Glucuronic Acid (C) +0.0 -0.2 +0.2 -0.4 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.2 +0.1 +0.1 -0.5
carbon source Glucuronamide (C) -0.6 +0.4 +0.1 +0.0 +0.6
carbon source D-Sorbitol (C) -0.3 +1.0 +0.0 -0.2 +0.0
carbon source Fumarate (C) -0.4 +0.3 -0.1 -0.1 +0.9
carbon source D-Sorbitol (C) -0.3 +0.8 -0.0 -0.2 +0.6
phage V1_10 -0.2 -0.0 +0.4 -0.0 +0.9
carbon source D-Galactose (C) +0.2 +0.5 +0.3 -0.2 +0.3
carbon source propionate (C) -0.1 +0.6 -0.0 -0.2 +0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +0.6 -0.1 +0.5 -0.1
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