Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11440 and ABID97_RS11445 are separated by 208 nucleotidesABID97_RS11445 and ABID97_RS11450 are separated by 95 nucleotidesABID97_RS11450 and ABID97_RS11455 overlap by 16 nucleotidesABID97_RS11455 and ABID97_RS11460 are separated by 530 nucleotides ABID97_RS11440: ABID97_RS11440 - AraC family transcriptional regulator, at 2,361,288 to 2,362,271 _RS11440 ABID97_RS11445: ABID97_RS11445 - alpha/beta fold hydrolase, at 2,362,480 to 2,363,430 _RS11445 ABID97_RS11450: ABID97_RS11450 - TetR/AcrR family transcriptional regulator, at 2,363,526 to 2,364,143 _RS11450 ABID97_RS11455: ABID97_RS11455 - hypothetical protein, at 2,364,128 to 2,364,316 _RS11455 ABID97_RS11460: ABID97_RS11460 - 2-hydroxychromene-2-carboxylate isomerase, at 2,364,847 to 2,365,431 _RS11460
Group Condition ABID97_RS11440 ABID97_RS11445 ABID97_RS11450 ABID97_RS11455 ABID97_RS11460
carbon source L-Alanine (C) -0.1 -0.4 -0.3 N.D. -0.7
carbon source L-Tryptophan (C) -0.4 -0.4 -0.2 N.D. -0.4
carbon source L-Histidine (C) -0.4 -0.1 -0.4 N.D. -0.3
carbon source succinate (C) -0.2 -0.3 -0.2 N.D. -0.2
carbon source Formate (C) -0.3 -0.3 -0.2 N.D. -0.1
carbon source L-Threonine (C) -0.4 +0.1 -0.1 N.D. -0.5
carbon source D-Xylose (C) -0.2 -0.2 -0.0 N.D. -0.4
carbon source a-Ketoglutaric (C) -0.2 -0.2 +0.0 N.D. -0.4
carbon source L-Lactate (C) -0.1 -0.4 -0.1 N.D. -0.2
carbon source D-Arabinose (C) -0.4 -0.2 -0.0 N.D. -0.1
carbon source D-Galactose (C) -0.3 -0.2 +0.0 N.D. -0.2
carbon source Glycerol (C) -0.4 -0.0 +0.1 N.D. -0.4
carbon source D-Gluconic Acid (C) -0.3 +0.0 +0.2 N.D. -0.4
carbon source L-Histidine (C) -0.3 -0.0 -0.3 N.D. +0.2
carbon source L-Glutamic (C) +0.1 -0.4 +0.1 N.D. -0.1
carbon source D-Glucuronic Acid (C) -0.2 -0.4 +0.1 N.D. +0.1
carbon source pyruvate (C) -0.3 -0.1 +0.2 N.D. -0.2
carbon source D-Glucose (C) -0.4 +0.2 +0.2 N.D. -0.3
carbon source L-Phenylalanine (C) -0.2 +0.3 -0.0 N.D. -0.3
phage V2_100 +0.1 -0.1 -0.4 N.D. +0.2
carbon source L-Alanine (C) -0.1 -0.4 +0.0 N.D. +0.3
carbon source D,L-Malic Acid (C) -0.2 +0.1 +0.4 N.D. -0.5
carbon source Tween 20 (C) -0.0 +0.0 +0.3 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.3 -0.2 N.D. -0.0
carbon source butyrate (C) -0.1 +0.3 -0.3 N.D. +0.2
carbon source L-Malic (C) -0.2 +0.2 +0.2 N.D. -0.1
carbon source propionate (C) -0.1 +0.4 +0.1 N.D. +0.4
carbon source Adenine (C) +0.1 +0.5 -0.0 N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.8 +0.5 N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.4 +0.7 N.D. +0.2
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