Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11385 and ABID97_RS11390 are separated by 10 nucleotidesABID97_RS11390 and ABID97_RS11395 are separated by 327 nucleotidesABID97_RS11395 and ABID97_RS11400 are separated by 33 nucleotidesABID97_RS11400 and ABID97_RS11405 are separated by 56 nucleotides ABID97_RS11385: ABID97_RS11385 - acyl-CoA dehydrogenase family protein, at 2,351,139 to 2,352,326 _RS11385 ABID97_RS11390: ABID97_RS11390 - acyl-CoA dehydrogenase, at 2,352,337 to 2,353,470 _RS11390 ABID97_RS11395: ABID97_RS11395 - alpha/beta fold hydrolase, at 2,353,798 to 2,354,610 _RS11395 ABID97_RS11400: ABID97_RS11400 - FAD-dependent oxidoreductase, at 2,354,644 to 2,355,420 _RS11400 ABID97_RS11405: ABID97_RS11405 - 2Fe-2S iron-sulfur cluster binding domain-containing protein, at 2,355,477 to 2,355,755 _RS11405
Group Condition ABID97_RS11385 ABID97_RS11390 ABID97_RS11395 ABID97_RS11400 ABID97_RS11405
phage V2_100 +0.1 N.D. -0.2 -1.1 N.D.
carbon source propionate (C) +0.1 N.D. -0.2 -1.0 N.D.
carbon source L-Alanine (C) -0.3 N.D. -0.3 -0.5 N.D.
carbon source D-Serine (C) -0.0 N.D. -0.4 -0.4 N.D.
carbon source D,L-Malic Acid (C) -0.1 N.D. -0.2 -0.4 N.D.
carbon source D,L-Malic Acid (C) -0.2 N.D. +0.0 -0.5 N.D.
phage V1_10 +0.2 N.D. -0.1 -0.7 N.D.
carbon source D-Serine (C) +0.1 N.D. +0.1 -0.6 N.D.
carbon source L-Malic (C) +0.2 N.D. -0.2 -0.4 N.D.
carbon source succinate (C) +0.2 N.D. -0.1 -0.5 N.D.
carbon source Tween 20 (C) +0.3 N.D. -0.3 -0.3 N.D.
carbon source L-Leucine (C) +0.2 N.D. -0.2 -0.3 N.D.
plant outgrowth control Plant outgrowth control +0.3 N.D. -0.2 -0.3 N.D.
carbon source Adenine (C) -0.1 N.D. +0.3 -0.3 N.D.
phage V1_1 +0.1 N.D. +0.2 -0.4 N.D.
carbon source Fumarate (C) +0.1 N.D. +0.3 -0.3 N.D.
carbon source L-Glutamic (C) +0.1 N.D. +0.3 -0.3 N.D.
carbon source L-Histidine (C) -0.1 N.D. -0.2 +0.5 N.D.
carbon source casaminos (C) -0.1 N.D. +0.2 +0.4 N.D.
carbon source butyrate (C) -0.2 N.D. +0.8 -0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 N.D. +0.4 -0.3 N.D.
carbon source D-Glucose (C) +0.4 N.D. +0.2 +0.1 N.D.
carbon source Adenine (C) +0.3 N.D. +0.0 +0.5 N.D.
carbon source propionate (C) -0.1 N.D. +0.3 +0.6 N.D.
carbon source Ethanol (C) +0.1 N.D. +0.5 +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. -0.1 +1.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. +0.3 +1.1 N.D.
carbon source butyrate (C) +0.2 N.D. +1.3 +0.4 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.1 N.D. +2.2 -0.4 N.D.
carbon source L-tyrosine (C) +0.2 N.D. +2.0 -0.2 N.D.
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