Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS11350 and ABID97_RS11355 are separated by 19 nucleotidesABID97_RS11355 and ABID97_RS11360 overlap by 4 nucleotidesABID97_RS11360 and ABID97_RS11365 are separated by 31 nucleotidesABID97_RS11365 and ABID97_RS11370 are separated by 78 nucleotides ABID97_RS11350: ABID97_RS11350 - aldehyde dehydrogenase family protein, at 2,342,572 to 2,344,035 _RS11350 ABID97_RS11355: ABID97_RS11355 - acyl-CoA dehydrogenase family protein, at 2,344,055 to 2,345,227 _RS11355 ABID97_RS11360: ABID97_RS11360 - acyl-CoA dehydrogenase family protein, at 2,345,224 to 2,346,258 _RS11360 ABID97_RS11365: ABID97_RS11365 - AMP-binding protein, at 2,346,290 to 2,347,810 _RS11365 ABID97_RS11370: ABID97_RS11370 - nitronate monooxygenase family protein, at 2,347,889 to 2,348,866 _RS11370
Group Condition ABID97_RS11350 ABID97_RS11355 ABID97_RS11360 ABID97_RS11365 ABID97_RS11370
carbon source Glycolic Acid (C) -0.6 -0.2 -0.7 +0.2 -0.2
carbon source D,L-Lactate (C) -0.6 -0.4 -0.5 +0.1 -0.0
phage V2_10 +0.3 -1.7 +0.1 -0.1 -0.0
carbon source D-Glucose (C) +0.1 -0.8 -0.4 -0.1 -0.1
carbon source L-Alanine (C) -0.2 -0.4 -0.8 +0.0 +0.2
carbon source Fumarate (C) -0.3 -0.8 -0.0 +0.1 -0.1
phage V1_1 +0.0 -0.8 -0.4 -0.1 +0.1
carbon source Glucuronamide (C) +0.3 -0.9 -0.4 +0.0 +0.1
carbon source propionate (C) -0.4 -0.6 +0.6 -0.1 -0.1
carbon source L-Arabinose (C) -0.2 +0.5 -0.8 +0.0 +0.0
carbon source L-Proline (C) +0.3 -0.6 -0.1 +0.1 -0.3
carbon source L-Malic (C) -0.3 +0.9 -0.7 -0.0 -0.1
carbon source L-tyrosine (C) +0.2 +0.4 +0.2 -0.3 -0.5
carbon source D-Galactose (C) +0.2 +0.6 -0.6 -0.2 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.0 +0.6 -0.5 +0.2 -0.2
carbon source Glucuronamide (C) +0.3 +0.4 -0.6 -0.1 +0.1
carbon source propionate (C) -0.2 +0.9 -0.5 +0.2 -0.1
carbon source butyrate (C) -0.0 -0.7 +0.8 +0.2 +0.0
carbon source L-Fucose (C) -0.3 +0.6 -0.3 +0.1 +0.3
carbon source L-tyrosine (C) -0.1 +0.7 +0.1 -0.0 -0.3
carbon source L-Histidine (C) +0.3 -0.5 +1.0 -0.0 -0.2
carbon source D-Mannose (C) -0.4 +1.0 +0.2 -0.1 +0.0
carbon source L-Histidine (C) -0.6 +0.4 +1.0 +0.1 -0.2
carbon source D,L-Malic Acid (C) +0.1 +0.4 +0.5 +0.1 -0.3
carbon source L-Alanine (C) -0.4 +0.3 +0.7 -0.1 +0.3
r2a outgrowth control R2A outgrowth control -0.3 -0.0 +1.1 +0.0 +0.1
carbon source D,L-Malic Acid (C) -1.1 +1.5 +0.8 -0.2 +0.2
carbon source D-Glucuronic Acid (C) +0.2 +0.4 +0.6 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.4 -0.1 +0.2 -0.4 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +1.1 +0.0 +0.2 +0.6
remove
ABID97_RS11350
plot		 remove
ABID97_RS11355
plot		 remove
ABID97_RS11360		 remove
ABID97_RS11365
plot		 remove
ABID97_RS11370
plot