Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11325 and ABID97_RS11330 are separated by 20 nucleotidesABID97_RS11330 and ABID97_RS11335 are separated by 3 nucleotidesABID97_RS11335 and ABID97_RS11340 are separated by 5 nucleotidesABID97_RS11340 and ABID97_RS11345 are separated by 7 nucleotides ABID97_RS11325: ABID97_RS11325 - ATP-binding cassette domain-containing protein, at 2,337,810 to 2,338,595 _RS11325 ABID97_RS11330: ABID97_RS11330 - enoyl-CoA hydratase-related protein, at 2,338,616 to 2,339,410 _RS11330 ABID97_RS11335: ABID97_RS11335 - thiolase family protein, at 2,339,414 to 2,340,580 _RS11335 ABID97_RS11340: ABID97_RS11340 - OB-fold domain-containing protein, at 2,340,586 to 2,341,023 _RS11340 ABID97_RS11345: ABID97_RS11345 - class I adenylate-forming enzyme family protein, at 2,341,031 to 2,342,575 _RS11345
Group Condition ABID97_RS11325 ABID97_RS11330 ABID97_RS11335 ABID97_RS11340 ABID97_RS11345
carbon source D-Serine (C) -1.7 N.D. -0.3 -0.4 +0.1
carbon source L-Histidine (C) -0.6 N.D. -0.5 -0.5 -0.1
carbon source L-Fucose (C) -1.0 N.D. -0.2 -0.3 -0.1
carbon source D,L-Malic Acid (C) -0.1 N.D. -0.9 -0.4 -0.0
carbon source D,L-Malic Acid (C) -0.2 N.D. -1.1 +0.1 -0.2
carbon source casaminos (C) -0.2 N.D. -0.7 -0.4 +0.0
carbon source D-Glucose (C) -1.0 N.D. -0.1 -0.3 +0.2
carbon source Glycolic Acid (C) -0.4 N.D. -0.3 -0.4 +0.0
carbon source D-Xylose (C) -0.5 N.D. -0.7 -0.0 +0.0
carbon source Adenine (C) -0.6 N.D. -0.4 -0.2 +0.0
carbon source D-Xylose (C) -1.0 N.D. +0.2 -0.3 +0.0
carbon source Ethanol (C) -1.1 N.D. +0.0 +0.2 -0.1
carbon source Glycerol (C) -0.7 N.D. +0.2 -0.4 +0.1
carbon source L-Proline (C) -0.4 N.D. +0.3 -0.4 -0.2
carbon source butyrate (C) -0.7 N.D. +0.1 -0.3 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. -0.5 +0.2 +0.1
carbon source D,L-Lactate (C) -0.9 N.D. +0.4 -0.0 +0.1
carbon source L-Histidine (C) +0.4 N.D. -0.2 -0.4 +0.2
carbon source L-Arabinose (C) +0.6 N.D. -0.0 -0.5 +0.1
carbon source pyruvate (C) -0.3 N.D. +0.6 -0.2 +0.1
carbon source propionate (C) -0.9 N.D. +0.5 +0.5 +0.1
carbon source Formate (C) +0.2 N.D. +0.5 -0.3 -0.1
carbon source L-Alanine (C) -0.5 N.D. +0.6 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 N.D. -0.4 -0.1 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 N.D. -0.2 +0.3 +0.3
carbon source Gly-Glu (C) +0.3 N.D. +0.4 -0.1 +0.3
carbon source L-Asparagine (C) +0.2 N.D. +0.7 -0.2 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.3 N.D. +0.8 +0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 N.D. +0.6 +0.1 -0.0
carbon source propionate (C) +0.2 N.D. +1.0 +0.6 +0.1
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