Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11300 and ABID97_RS11305 are separated by 168 nucleotidesABID97_RS11305 and ABID97_RS11310 overlap by 29 nucleotidesABID97_RS11310 and ABID97_RS11315 are separated by 210 nucleotidesABID97_RS11315 and ABID97_RS11320 are separated by 5 nucleotides ABID97_RS11300: ABID97_RS11300 - hypothetical protein, at 2,333,440 to 2,334,390 _RS11300 ABID97_RS11305: ABID97_RS11305 - hypothetical protein, at 2,334,559 to 2,334,840 _RS11305 ABID97_RS11310: ABID97_RS11310 - LysR family transcriptional regulator, at 2,334,812 to 2,335,723 _RS11310 ABID97_RS11315: ABID97_RS11315 - ABC transporter substrate-binding protein, at 2,335,934 to 2,336,935 _RS11315 ABID97_RS11320: ABID97_RS11320 - ABC transporter permease subunit, at 2,336,941 to 2,337,798 _RS11320
Group Condition ABID97_RS11300 ABID97_RS11305 ABID97_RS11310 ABID97_RS11315 ABID97_RS11320
carbon source D-Glucose (C) -0.4 N.D. N.D. -0.3 -0.8
carbon source L-Alanine (C) -0.4 N.D. N.D. -0.3 -0.2
carbon source D-Xylose (C) -0.1 N.D. N.D. +0.1 -0.6
carbon source butyrate (C) -0.2 N.D. N.D. +0.2 -0.3
carbon source D-Gluconic Acid (C) -0.4 N.D. N.D. +0.2 -0.1
carbon source pyruvate (C) -0.3 N.D. N.D. +0.3 -0.3
carbon source D,L-Malic Acid (C) +0.5 N.D. N.D. +0.2 -1.0
carbon source propionate (C) +0.2 N.D. N.D. +0.1 -0.6
carbon source Gly-Glu (C) -0.2 N.D. N.D. +0.3 -0.3
carbon source L-Histidine (C) +0.1 N.D. N.D. +0.2 -0.5
carbon source L-Histidine (C) +0.4 N.D. N.D. +0.2 -0.8
carbon source Gly-Glu (C) -0.1 N.D. N.D. +0.3 -0.4
carbon source D-Ribose (C) +0.3 N.D. N.D. +0.1 -0.4
carbon source propionate (C) +0.3 N.D. N.D. +0.2 -0.5
carbon source Formate (C) +0.4 N.D. N.D. +0.1 -0.4
carbon source Tween 20 (C) +0.2 N.D. N.D. +0.3 -0.4
plant outgrowth control Plant outgrowth control +0.5 N.D. N.D. +0.1 -0.5
carbon source L-Malic (C) -0.4 N.D. N.D. +0.4 +0.2
carbon source L-Lactate (C) -0.0 N.D. N.D. +0.5 -0.3
carbon source acetate (C) +0.2 N.D. N.D. +0.4 -0.4
carbon source D-Glucose (C) +0.2 N.D. N.D. +0.5 -0.3
carbon source acetate (C) +0.3 N.D. N.D. +0.4 -0.3
carbon source D-Galactose (C) +0.2 N.D. N.D. +0.6 -0.2
carbon source D-Serine (C) +0.5 N.D. N.D. +0.5 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 N.D. N.D. +0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 N.D. N.D. +0.2 -0.3
carbon source L-Leucine (C) +0.4 N.D. N.D. +0.3 +0.1
carbon source D-Sorbitol (C) +0.3 N.D. N.D. +0.4 +0.1
carbon source D,L-Lactate (C) +0.4 N.D. N.D. +0.5 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 N.D. N.D. +0.1 +0.7
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