Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11205 and ABID97_RS11210 are separated by 9 nucleotidesABID97_RS11210 and ABID97_RS11215 are separated by 112 nucleotidesABID97_RS11215 and ABID97_RS11220 are separated by 46 nucleotidesABID97_RS11220 and ABID97_RS11225 are separated by 96 nucleotides ABID97_RS11205: ABID97_RS11205 - branched-chain amino acid ABC transporter permease, at 2,316,737 to 2,317,771 _RS11205 ABID97_RS11210: ABID97_RS11210 - branched-chain amino acid ABC transporter permease, at 2,317,781 to 2,318,668 _RS11210 ABID97_RS11215: ABID97_RS11215 - ABC transporter substrate-binding protein, at 2,318,781 to 2,320,043 _RS11215 ABID97_RS11220: ABID97_RS11220 - shikimate dehydrogenase, at 2,320,090 to 2,320,923 _RS11220 ABID97_RS11225: ABID97_RS11225 - glycerol dehydrogenase, at 2,321,020 to 2,322,153 _RS11225
Group Condition ABID97_RS11205 ABID97_RS11210 ABID97_RS11215 ABID97_RS11220 ABID97_RS11225
carbon source succinate (C) -0.2 -0.4 -0.4 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.1 +0.2 -1.1 N.D. N.D.
carbon source L-Histidine (C) -0.0 -0.3 -0.4 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.2 -0.2 N.D. N.D.
plant outgrowth control Plant outgrowth control -0.0 -0.3 -0.3 N.D. N.D.
carbon source Glycerol (C) -0.2 -0.3 -0.1 N.D. N.D.
carbon source Glucuronamide (C) -0.1 -0.3 -0.2 N.D. N.D.
carbon source L-Threonine (C) -0.2 -0.1 -0.2 N.D. N.D.
carbon source D-Ribose (C) -0.2 -0.3 +0.1 N.D. N.D.
carbon source D-Galactose (C) -0.3 -0.2 +0.2 N.D. N.D.
carbon source butyrate (C) +0.1 -0.1 -0.3 N.D. N.D.
carbon source L-Fucose (C) +0.2 -0.2 -0.2 N.D. N.D.
carbon source propionate (C) +0.3 -0.7 +0.2 N.D. N.D.
phage V2_1 +0.2 -0.4 -0.0 N.D. N.D.
carbon source a-Ketoglutaric (C) -0.3 +0.2 +0.0 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.4 +0.0 N.D. N.D.
carbon source D-Fructose (C) +0.0 +0.4 -0.5 N.D. N.D.
carbon source D-Serine (C) +0.3 -0.2 -0.2 N.D. N.D.
carbon source D-Sorbitol (C) -0.3 +0.2 +0.0 N.D. N.D.
carbon source L-Fucose (C) +0.2 -0.4 +0.2 N.D. N.D.
carbon source L-Alanine (C) +0.3 +0.1 -0.2 N.D. N.D.
carbon source D-Galactose (C) -0.2 +0.1 +0.3 N.D. N.D.
carbon source D-Arabinose (C) +0.1 -0.2 +0.4 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.4 -0.2 +0.3 N.D. N.D.
r2a outgrowth control R2A outgrowth control +0.2 +0.3 +0.0 N.D. N.D.
carbon source Gly-Glu (C) +0.2 +0.2 +0.1 N.D. N.D.
carbon source L-Asparagine (C) +0.0 +0.4 +0.2 N.D. N.D.
phage V2_10 +0.2 -0.1 +0.5 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.7 -0.1 N.D. N.D.
phage V2_100 +0.4 +0.5 +0.4 N.D. N.D.
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